Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHOX2BQ99453 AC018470.1-201ENST00000624790 3129 ntBASIC17.52■□□□□ 0.4
PHOX2BQ99453 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHOX2BQ99453 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
PHOX2BQ99453 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PHOX2BQ99453 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHOX2BQ99453 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHOX2BQ99453 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHOX2BQ99453 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHOX2BQ99453 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PHOX2BQ99453 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHOX2BQ99453 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PHOX2BQ99453 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PHOX2BQ99453 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHOX2BQ99453 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHOX2BQ99453 IRX1P1-201ENST00000438849 1838 ntBASIC17.51■□□□□ 0.39
PHOX2BQ99453 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 AC092658.1-201ENST00000505836 891 ntBASIC17.51■□□□□ 0.39
PHOX2BQ99453 AC112698.1-201ENST00000510299 916 ntBASIC17.51■□□□□ 0.39
PHOX2BQ99453 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 AL512356.2-201ENST00000546955 174 ntBASIC17.51■□□□□ 0.39
PHOX2BQ99453 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 CU639417.3-201ENST00000624240 1404 ntBASIC17.51■□□□□ 0.39
PHOX2BQ99453 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 AP000997.3-201ENST00000623333 2250 ntBASIC17.51■□□□□ 0.39
PHOX2BQ99453 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.51■□□□□ 0.39
PHOX2BQ99453 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHOX2BQ99453 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 AL024508.2-201ENST00000607749 1894 ntBASIC17.5■□□□□ 0.39
PHOX2BQ99453 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 NOC2LP1-202ENST00000452600 2235 ntBASIC17.5■□□□□ 0.39
PHOX2BQ99453 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 HCG24-202ENST00000414398 717 ntTSL 3 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 AC140878.1-201ENST00000565277 250 ntBASIC17.5■□□□□ 0.39
PHOX2BQ99453 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.5■□□□□ 0.39
PHOX2BQ99453 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHOX2BQ99453 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms