Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 B3GAT3P1-201ENST00000471720 806 ntBASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 AC008622.2-201ENST00000617006 1229 ntBASIC13.18□□□□□ -0.3
AP1S3Q96PC3 AC130371.2-201ENST00000619443 611 ntBASIC13.18□□□□□ -0.3
AP1S3Q96PC3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 SDHAP2-201ENST00000455183 2001 ntBASIC13.18□□□□□ -0.3
AP1S3Q96PC3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.18□□□□□ -0.3
AP1S3Q96PC3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 DOC2GP-204ENST00000639052 2548 ntBASIC13.17□□□□□ -0.3
AP1S3Q96PC3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.17□□□□□ -0.3
AP1S3Q96PC3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 FSCN1P1-201ENST00000568912 1481 ntBASIC13.17□□□□□ -0.3
AP1S3Q96PC3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 ST20-AS1-201ENST00000560255 4223 ntBASIC13.17□□□□□ -0.3
AP1S3Q96PC3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.17□□□□□ -0.3
AP1S3Q96PC3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 AC073195.1-201ENST00000607241 877 ntBASIC13.17□□□□□ -0.3
AP1S3Q96PC3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.17□□□□□ -0.3
AP1S3Q96PC3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP1S3Q96PC3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.16□□□□□ -0.3
AP1S3Q96PC3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms