Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 AC006557.2-201ENST00000592985 1240 ntBASIC17.89■□□□□ 0.45
RPRD1AQ96P16 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPRD1AQ96P16 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 AL138688.1-201ENST00000624851 1594 ntBASIC17.88■□□□□ 0.45
RPRD1AQ96P16 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 LINC00982-205ENST00000420957 435 ntBASIC17.88■□□□□ 0.45
RPRD1AQ96P16 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 AC105339.3-201ENST00000560043 636 ntBASIC17.88■□□□□ 0.45
RPRD1AQ96P16 AC012640.2-201ENST00000561606 901 ntBASIC17.88■□□□□ 0.45
RPRD1AQ96P16 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPRD1AQ96P16 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 AC004706.3-202ENST00000621574 984 ntBASIC17.87■□□□□ 0.45
RPRD1AQ96P16 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 AC243591.1-201ENST00000452967 1364 ntBASIC17.87■□□□□ 0.45
RPRD1AQ96P16 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPRD1AQ96P16 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 ACTG1P4-201ENST00000425123 1122 ntBASIC17.86■□□□□ 0.45
RPRD1AQ96P16 AC092910.1-201ENST00000482027 1129 ntBASIC17.86■□□□□ 0.45
RPRD1AQ96P16 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 AL139424.1-201ENST00000607572 797 ntBASIC17.86■□□□□ 0.45
RPRD1AQ96P16 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 AC116407.3-201ENST00000623905 1129 ntBASIC17.86■□□□□ 0.45
RPRD1AQ96P16 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPRD1AQ96P16 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms