Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 AL355312.1-201ENST00000407115 2176 ntBASIC22.66■■□□□ 1.22
NBPF4Q96M43 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 TFAMP1-201ENST00000412727 736 ntBASIC22.66■■□□□ 1.22
NBPF4Q96M43 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 SPDYE11-202ENST00000450699 704 ntBASIC22.66■■□□□ 1.22
NBPF4Q96M43 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 SPDYE9P-201ENST00000570642 692 ntBASIC22.66■■□□□ 1.22
NBPF4Q96M43 CD7-202ENST00000578509 925 ntTSL 3 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 AC015911.4-201ENST00000588022 1070 ntBASIC22.66■■□□□ 1.22
NBPF4Q96M43 SPDYE10P-202ENST00000612005 668 ntBASIC22.66■■□□□ 1.22
NBPF4Q96M43 SPDYE8P-202ENST00000612377 668 ntBASIC22.66■■□□□ 1.22
NBPF4Q96M43 Z92544.3-201ENST00000624747 417 ntBASIC22.66■■□□□ 1.22
NBPF4Q96M43 CD276-201ENST00000318424 2738 ntTSL 5 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.66■■□□□ 1.22
NBPF4Q96M43 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NBPF4Q96M43 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 AL592309.1-201ENST00000443127 649 ntBASIC22.65■■□□□ 1.22
NBPF4Q96M43 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 FAM86C2P-203ENST00000528684 1004 ntBASIC22.65■■□□□ 1.22
NBPF4Q96M43 DUX4L27-201ENST00000554796 1261 ntBASIC22.65■■□□□ 1.22
NBPF4Q96M43 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC22.65■■□□□ 1.22
NBPF4Q96M43 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
NBPF4Q96M43 AL354751.1-201ENST00000412768 1863 ntBASIC22.64■■□□□ 1.22
NBPF4Q96M43 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NBPF4Q96M43 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NBPF4Q96M43 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
NBPF4Q96M43 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
NBPF4Q96M43 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NBPF4Q96M43 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NBPF4Q96M43 GPS2P2-201ENST00000430745 888 ntBASIC22.64■■□□□ 1.21
NBPF4Q96M43 AC005237.2-201ENST00000434368 219 ntBASIC22.64■■□□□ 1.21
NBPF4Q96M43 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NBPF4Q96M43 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NBPF4Q96M43 DUX4L17-201ENST00000557360 1267 ntBASIC22.64■■□□□ 1.21
NBPF4Q96M43 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC22.64■■□□□ 1.21
NBPF4Q96M43 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC22.64■■□□□ 1.21
NBPF4Q96M43 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC22.64■■□□□ 1.21
NBPF4Q96M43 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NBPF4Q96M43 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
NBPF4Q96M43 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC22.64■■□□□ 1.21
NBPF4Q96M43 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NBPF4Q96M43 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NBPF4Q96M43 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NBPF4Q96M43 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.63■■□□□ 1.21
NBPF4Q96M43 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NBPF4Q96M43 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms