Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 AC046158.3-201ENST00000624947 2558 ntBASIC16.56■□□□□ 0.24
ITCHQ96J02 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.56■□□□□ 0.24
ITCHQ96J02 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ITCHQ96J02 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 AC113347.1-201ENST00000413321 391 ntBASIC16.56■□□□□ 0.24
ITCHQ96J02 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.56■□□□□ 0.24
ITCHQ96J02 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 AC093827.2-201ENST00000512654 315 ntBASIC16.56■□□□□ 0.24
ITCHQ96J02 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.56■□□□□ 0.24
ITCHQ96J02 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.56■□□□□ 0.24
ITCHQ96J02 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.56■□□□□ 0.24
ITCHQ96J02 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.56■□□□□ 0.24
ITCHQ96J02 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.56■□□□□ 0.24
ITCHQ96J02 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.56■□□□□ 0.24
ITCHQ96J02 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.55■□□□□ 0.24
ITCHQ96J02 AC105020.1-201ENST00000435356 2205 ntBASIC16.55■□□□□ 0.24
ITCHQ96J02 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.55■□□□□ 0.24
ITCHQ96J02 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.55■□□□□ 0.24
ITCHQ96J02 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 AC005915.1-201ENST00000624912 2018 ntBASIC16.55■□□□□ 0.24
ITCHQ96J02 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
ITCHQ96J02 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.55■□□□□ 0.24
ITCHQ96J02 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
ITCHQ96J02 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 SLC25A1P3-201ENST00000395415 828 ntBASIC16.55■□□□□ 0.24
ITCHQ96J02 HOMER2P1-201ENST00000455653 964 ntBASIC16.55■□□□□ 0.24
ITCHQ96J02 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.55■□□□□ 0.24
ITCHQ96J02 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.55■□□□□ 0.24
ITCHQ96J02 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ITCHQ96J02 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
ITCHQ96J02 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.55■□□□□ 0.24
ITCHQ96J02 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.55■□□□□ 0.24
ITCHQ96J02 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ITCHQ96J02 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ITCHQ96J02 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ITCHQ96J02 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ITCHQ96J02 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.54■□□□□ 0.24
ITCHQ96J02 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ITCHQ96J02 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.54■□□□□ 0.24
ITCHQ96J02 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ITCHQ96J02 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ITCHQ96J02 TERF1P1-201ENST00000311003 1181 ntBASIC16.54■□□□□ 0.24
ITCHQ96J02 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.54■□□□□ 0.24
ITCHQ96J02 AC117947.1-201ENST00000427448 529 ntBASIC16.54■□□□□ 0.24
ITCHQ96J02 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.54■□□□□ 0.24
ITCHQ96J02 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ITCHQ96J02 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.54■□□□□ 0.24
ITCHQ96J02 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ITCHQ96J02 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ITCHQ96J02 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ITCHQ96J02 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ITCHQ96J02 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ITCHQ96J02 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ITCHQ96J02 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ITCHQ96J02 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms