Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
TIFAQ96CG3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIFAQ96CG3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.43■□□□□ 0.54
TIFAQ96CG3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TIFAQ96CG3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TIFAQ96CG3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIFAQ96CG3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
TIFAQ96CG3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIFAQ96CG3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIFAQ96CG3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TIFAQ96CG3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.42■□□□□ 0.54
TIFAQ96CG3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 AC087163.2-201ENST00000457299 853 ntBASIC18.42■□□□□ 0.54
TIFAQ96CG3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 AL606495.2-201ENST00000605867 535 ntBASIC18.42■□□□□ 0.54
TIFAQ96CG3 AC116407.2-201ENST00000613639 860 ntBASIC18.42■□□□□ 0.54
TIFAQ96CG3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 HCG11-201ENST00000411553 5696 ntBASIC18.42■□□□□ 0.54
TIFAQ96CG3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TIFAQ96CG3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TIFAQ96CG3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 BCL2-203ENST00000589955 5011 ntBASIC18.41■□□□□ 0.54
TIFAQ96CG3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 MYCLP1-201ENST00000372451 1075 ntBASIC18.41■□□□□ 0.54
TIFAQ96CG3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 AC084121.4-201ENST00000641598 221 ntBASIC18.41■□□□□ 0.54
TIFAQ96CG3 AF228730.8-201ENST00000642140 221 ntBASIC18.41■□□□□ 0.54
TIFAQ96CG3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 GNAS-203ENST00000306120 1878 ntBASIC18.41■□□□□ 0.54
TIFAQ96CG3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIFAQ96CG3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TIFAQ96CG3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TIFAQ96CG3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TIFAQ96CG3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.4■□□□□ 0.54
TIFAQ96CG3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.4■□□□□ 0.54
TIFAQ96CG3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.4■□□□□ 0.54
TIFAQ96CG3 HILS1-202ENST00000545329 423 ntBASIC18.4■□□□□ 0.54
TIFAQ96CG3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TIFAQ96CG3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIFAQ96CG3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms