Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.23■□□□□ 0.03
SPTSSAQ969W0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPTSSAQ969W0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPTSSAQ969W0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SPTSSAQ969W0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPTSSAQ969W0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPTSSAQ969W0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPTSSAQ969W0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.23■□□□□ 0.03
SPTSSAQ969W0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
SPTSSAQ969W0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPTSSAQ969W0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 AC116353.5-201ENST00000638148 1699 ntBASIC15.22■□□□□ 0.03
SPTSSAQ969W0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 LINC00265-3P-201ENST00000447588 903 ntBASIC15.22■□□□□ 0.03
SPTSSAQ969W0 KRT17P6-201ENST00000453795 1220 ntBASIC15.22■□□□□ 0.03
SPTSSAQ969W0 TPSP2-201ENST00000561760 610 ntBASIC15.22■□□□□ 0.03
SPTSSAQ969W0 STK25P1-201ENST00000585406 838 ntBASIC15.22■□□□□ 0.03
SPTSSAQ969W0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 AC069148.1-201ENST00000608741 768 ntBASIC15.22■□□□□ 0.03
SPTSSAQ969W0 AC091076.1-201ENST00000610741 619 ntBASIC15.22■□□□□ 0.03
SPTSSAQ969W0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 KRT8P10-201ENST00000450021 1447 ntBASIC15.22■□□□□ 0.03
SPTSSAQ969W0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.22■□□□□ 0.03
SPTSSAQ969W0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPTSSAQ969W0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 AL121761.2-201ENST00000598007 1648 ntBASIC15.21■□□□□ 0.03
SPTSSAQ969W0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 TP73-AS1-210ENST00000637775 1455 ntBASIC15.21■□□□□ 0.03
SPTSSAQ969W0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 AC003669.1-201ENST00000334569 611 ntBASIC15.21■□□□□ 0.03
SPTSSAQ969W0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 AC091607.1-201ENST00000490318 1060 ntBASIC15.21■□□□□ 0.03
SPTSSAQ969W0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 AC012313.1-201ENST00000593393 3059 ntBASIC15.21■□□□□ 0.03
SPTSSAQ969W0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SPTSSAQ969W0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms