Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 AL121912.1-201ENST00000603683 238 ntBASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 AD001527.2-201ENST00000622994 785 ntBASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SMARCC2Q8TAQ2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 AL160237.2-201ENST00000556165 472 ntBASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 AC008608.2-201ENST00000606089 416 ntBASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 AP001269.4-201ENST00000609611 512 ntBASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCC2Q8TAQ2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms