Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CFAP43Q8NDM7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CFAP43Q8NDM7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CFAP43Q8NDM7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CFAP43Q8NDM7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC26.87■■□□□ 1.89
CFAP43Q8NDM7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CFAP43Q8NDM7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 SPDYE22P-201ENST00000582158 798 ntBASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 TUBB3P1-201ENST00000405796 1332 ntBASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFAP43Q8NDM7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 TREML5P-201ENST00000421694 576 ntBASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 FAM58DP-201ENST00000428076 619 ntBASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CFAP43Q8NDM7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 AL390961.4-201ENST00000623958 2535 ntBASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 AC002056.1-201ENST00000395613 760 ntBASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 MIR943-201ENST00000401286 94 ntBASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 COX5BP8-201ENST00000416911 349 ntBASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 FO538757.1-201ENST00000623083 1397 ntBASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC26.84■■□□□ 1.89
CFAP43Q8NDM7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 MIR6752-201ENST00000618442 71 ntBASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CFAP43Q8NDM7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
CFAP43Q8NDM7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 AC079140.1-201ENST00000508039 487 ntBASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 AC025048.6-201ENST00000634326 1161 ntBASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC26.82■■□□□ 1.88
CFAP43Q8NDM7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms