Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.39■□□□□ 0.53
TMEM35BQ8NCS4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TMEM35BQ8NCS4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM35BQ8NCS4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM35BQ8NCS4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 KRT18P31-201ENST00000506277 1292 ntBASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 AP001269.4-201ENST00000609611 512 ntBASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM35BQ8NCS4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 TSPY19P-201ENST00000418461 509 ntBASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 TSPY18P-201ENST00000441642 509 ntBASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 AC106795.1-205ENST00000512851 1056 ntBASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 AC091304.2-201ENST00000564639 760 ntBASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 AL732292.2-201ENST00000609649 430 ntBASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 AC073592.4-201ENST00000623827 446 ntBASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 AC148477.5-201ENST00000625164 1645 ntBASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 AC079776.2-201ENST00000641154 1609 ntBASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 LINC02012-201ENST00000608206 1725 ntBASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM35BQ8NCS4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM35BQ8NCS4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM35BQ8NCS4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM35BQ8NCS4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms