Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 AL596257.1-201ENST00000641463 2694 ntBASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 AC005104.2-201ENST00000427818 678 ntBASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 HYMAI.1-201ENST00000620949 238 ntBASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC50Q8IVM0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC50Q8IVM0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC50Q8IVM0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms