Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 AL135999.2-201ENST00000622438 1686 ntBASIC11.95□□□□□ -0.5
CSMD3Q7Z407 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 BX276092.7-203ENST00000637198 1536 ntBASIC11.94□□□□□ -0.5
CSMD3Q7Z407 REXO1L9P-201ENST00000604264 2108 ntBASIC11.94□□□□□ -0.5
CSMD3Q7Z407 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 MIR346-201ENST00000362234 95 ntBASIC11.94□□□□□ -0.5
CSMD3Q7Z407 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.94□□□□□ -0.5
CSMD3Q7Z407 MIR6805-201ENST00000615055 62 ntBASIC11.94□□□□□ -0.5
CSMD3Q7Z407 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 AL020996.1-203ENST00000536896 2307 ntBASIC11.94□□□□□ -0.5
CSMD3Q7Z407 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 AKAP8P1-201ENST00000434743 1349 ntBASIC11.94□□□□□ -0.5
CSMD3Q7Z407 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 AC004945.1-201ENST00000416738 983 ntBASIC11.94□□□□□ -0.5
CSMD3Q7Z407 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 AC129492.6-201ENST00000611383 1305 ntBASIC11.94□□□□□ -0.5
CSMD3Q7Z407 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CSMD3Q7Z407 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 WASH6P-202ENST00000359512 1437 ntBASIC11.93□□□□□ -0.5
CSMD3Q7Z407 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 USP49-202ENST00000373010 2446 ntTSL 5 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 AC119751.2-201ENST00000504529 210 ntBASIC11.93□□□□□ -0.5
CSMD3Q7Z407 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 AC007613.1-201ENST00000572811 2597 ntBASIC11.93□□□□□ -0.5
CSMD3Q7Z407 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 AC109635.5-201ENST00000533593 962 ntBASIC11.93□□□□□ -0.5
CSMD3Q7Z407 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.93□□□□□ -0.5
CSMD3Q7Z407 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 EFTUD1P1-204ENST00000560401 1798 ntBASIC11.92□□□□□ -0.5
CSMD3Q7Z407 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 ENSA-206ENST00000361631 725 ntTSL 2 BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 TP53TG3HP-202ENST00000569755 579 ntBASIC11.92□□□□□ -0.5
CSMD3Q7Z407 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms