Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TUBA1AQ71U36 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TUBA1AQ71U36 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.08■□□□□ 0.17
TUBA1AQ71U36 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.17
TUBA1AQ71U36 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 AL031133.1-201ENST00000406807 723 ntBASIC16.08■□□□□ 0.16
TUBA1AQ71U36 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 VENTXP5-201ENST00000523979 775 ntBASIC16.08■□□□□ 0.16
TUBA1AQ71U36 HYMAI.1-201ENST00000620949 238 ntBASIC16.08■□□□□ 0.16
TUBA1AQ71U36 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBA1AQ71U36 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 AL136038.4-201ENST00000603606 1261 ntBASIC16.07■□□□□ 0.16
TUBA1AQ71U36 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.07■□□□□ 0.16
TUBA1AQ71U36 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 AC093010.1-201ENST00000473625 1624 ntBASIC16.07■□□□□ 0.16
TUBA1AQ71U36 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBA1AQ71U36 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 AL391807.1-203ENST00000604392 2365 ntBASIC16.06■□□□□ 0.16
TUBA1AQ71U36 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.06■□□□□ 0.16
TUBA1AQ71U36 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TUBA1AQ71U36 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms