Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 KRT8P23-201ENST00000560090 1207 ntBASIC14.31□□□□□ -0.12
VPS13CQ709C8 AL158211.3-201ENST00000607385 239 ntBASIC14.31□□□□□ -0.12
VPS13CQ709C8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 AC140878.1-201ENST00000565277 250 ntBASIC14.3□□□□□ -0.12
VPS13CQ709C8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 AC009477.1-201ENST00000452936 217 ntBASIC14.3□□□□□ -0.12
VPS13CQ709C8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 ACA64.2-201ENST00000459014 129 ntBASIC14.3□□□□□ -0.12
VPS13CQ709C8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VPS13CQ709C8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13CQ709C8 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.29□□□□□ -0.12
VPS13CQ709C8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 AC100757.3-201ENST00000622361 1406 ntBASIC14.29□□□□□ -0.12
VPS13CQ709C8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 AL662799.1-202ENST00000614205 422 ntBASIC14.29□□□□□ -0.12
VPS13CQ709C8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13CQ709C8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.29□□□□□ -0.12
VPS13CQ709C8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13CQ709C8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.28□□□□□ -0.12
VPS13CQ709C8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms