Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 HOXB1-202ENST00000577092 1414 ntBASIC14.27□□□□□ -0.12
TREML4Q6UXN2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TREML4Q6UXN2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.27□□□□□ -0.12
TREML4Q6UXN2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.27□□□□□ -0.12
TREML4Q6UXN2 TNRC18P3-201ENST00000441896 2691 ntBASIC14.27□□□□□ -0.12
TREML4Q6UXN2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TREML4Q6UXN2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TREML4Q6UXN2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 MINOS1P3-201ENST00000457048 203 ntBASIC14.27□□□□□ -0.13
TREML4Q6UXN2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 AC073648.2-201ENST00000510116 352 ntBASIC14.27□□□□□ -0.13
TREML4Q6UXN2 GUSBP12-201ENST00000513727 720 ntBASIC14.27□□□□□ -0.13
TREML4Q6UXN2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 CROCCP2-202ENST00000412962 2773 ntBASIC14.27□□□□□ -0.13
TREML4Q6UXN2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.27□□□□□ -0.13
TREML4Q6UXN2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.26□□□□□ -0.13
TREML4Q6UXN2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 AC009065.1-201ENST00000564055 1225 ntBASIC14.26□□□□□ -0.13
TREML4Q6UXN2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 AC027796.2-201ENST00000575326 344 ntBASIC14.26□□□□□ -0.13
TREML4Q6UXN2 AC140113.2-201ENST00000604370 208 ntBASIC14.26□□□□□ -0.13
TREML4Q6UXN2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREML4Q6UXN2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.25□□□□□ -0.13
TREML4Q6UXN2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
TREML4Q6UXN2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREML4Q6UXN2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TREML4Q6UXN2 KRT8P7-201ENST00000533003 1432 ntBASIC14.25□□□□□ -0.13
TREML4Q6UXN2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREML4Q6UXN2 AC243591.1-201ENST00000452967 1364 ntBASIC14.25□□□□□ -0.13
TREML4Q6UXN2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREML4Q6UXN2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.25□□□□□ -0.13
TREML4Q6UXN2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TREML4Q6UXN2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREML4Q6UXN2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms