Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.71■□□□□ 0.58
SLC27A1Q6PCB7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
SLC27A1Q6PCB7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 MIR3687-2-201ENST00000577708 61 ntBASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 MIR3687-1-201ENST00000614492 61 ntBASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 AC092865.6-201ENST00000642101 219 ntBASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 NOC2LP2-201ENST00000407594 1944 ntBASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC27A1Q6PCB7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 HTR7P1-202ENST00000624664 4411 ntBASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 MCCD1P2-201ENST00000423228 335 ntBASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 RHOQP3-201ENST00000437982 621 ntBASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 AC087163.2-201ENST00000457299 853 ntBASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC27A1Q6PCB7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 AL138688.1-201ENST00000624851 1594 ntBASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 AC016396.2-201ENST00000562575 1417 ntBASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 AC112482.1-201ENST00000492080 688 ntBASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 AL513190.1-201ENST00000621254 727 ntBASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC27A1Q6PCB7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 SLC25A6P2-201ENST00000497974 877 ntBASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 CXCL1P1-201ENST00000502804 216 ntBASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 AC004877.2-201ENST00000623941 599 ntBASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms