Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 DRAXINP1-201ENST00000437611 948 ntBASIC15.82■□□□□ 0.12
NIPAL3Q6P499 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NIPAL3Q6P499 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 NFIC-211ENST00000641145 8399 ntBASIC15.81■□□□□ 0.12
NIPAL3Q6P499 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 AC246785.2-201ENST00000432512 513 ntBASIC15.81■□□□□ 0.12
NIPAL3Q6P499 ATP5G2P1-201ENST00000433580 426 ntBASIC15.81■□□□□ 0.12
NIPAL3Q6P499 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.81■□□□□ 0.12
NIPAL3Q6P499 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 Z69720.1-201ENST00000601483 472 ntBASIC15.81■□□□□ 0.12
NIPAL3Q6P499 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 NPAP1P7-201ENST00000613027 823 ntBASIC15.81■□□□□ 0.12
NIPAL3Q6P499 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 AC116353.5-201ENST00000638148 1699 ntBASIC15.81■□□□□ 0.12
NIPAL3Q6P499 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
NIPAL3Q6P499 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 AC233702.3-201ENST00000578656 1387 ntBASIC15.8■□□□□ 0.12
NIPAL3Q6P499 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 AC091607.1-201ENST00000490318 1060 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms