Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 AL355312.1-201ENST00000407115 2176 ntBASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.58■□□□□ 0.08
RNFT1Q5M7Z0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 MKNK2P1-201ENST00000437526 628 ntBASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 FAM185BP-201ENST00000443595 716 ntBASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 AC027796.2-201ENST00000575326 344 ntBASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 AC023141.13-201ENST00000604991 943 ntBASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNFT1Q5M7Z0 ELL2P1-201ENST00000413990 1906 ntBASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 CEND1P1-201ENST00000451006 455 ntBASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 AC074386.1-202ENST00000463561 864 ntBASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 SLC25A6P2-201ENST00000497974 877 ntBASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 ACTL9-202ENST00000612068 1252 ntBASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.56■□□□□ 0.08
RNFT1Q5M7Z0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms