Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 AC002558.1-201ENST00000488906 803 ntBASIC19.75■□□□□ 0.75
LONRF3Q496Y0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 AC104692.2-201ENST00000603054 253 ntBASIC19.75■□□□□ 0.75
LONRF3Q496Y0 AC019129.2-201ENST00000609837 1235 ntBASIC19.75■□□□□ 0.75
LONRF3Q496Y0 AL353801.3-201ENST00000609898 542 ntBASIC19.75■□□□□ 0.75
LONRF3Q496Y0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.75■□□□□ 0.75
LONRF3Q496Y0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 AC106886.4-201ENST00000623557 2502 ntBASIC19.74■□□□□ 0.75
LONRF3Q496Y0 AC125634.1-201ENST00000438758 1403 ntBASIC19.74■□□□□ 0.75
LONRF3Q496Y0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LONRF3Q496Y0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 SLC25A1P3-201ENST00000395415 828 ntBASIC19.73■□□□□ 0.75
LONRF3Q496Y0 AP000347.1-202ENST00000435868 847 ntBASIC19.73■□□□□ 0.75
LONRF3Q496Y0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 AC005336.2-201ENST00000593183 939 ntBASIC19.73■□□□□ 0.75
LONRF3Q496Y0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 AC046185.3-201ENST00000623228 1824 ntBASIC19.73■□□□□ 0.75
LONRF3Q496Y0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LONRF3Q496Y0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 AKR1C7P-201ENST00000305623 895 ntBASIC19.72■□□□□ 0.75
LONRF3Q496Y0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms