Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ANKRD55Q3KP44 AC022188.1-201ENST00000620960 1664 ntBASIC14.46□□□□□ -0.1
ANKRD55Q3KP44 AC103702.1-201ENST00000548801 2630 ntBASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 AL353719.1-201ENST00000566847 864 ntBASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 AL139327.4-201ENST00000612362 153 ntBASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 AC073912.3-201ENST00000624414 853 ntBASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 AC093525.9-201ENST00000624961 1746 ntBASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 BX276092.7-203ENST00000637198 1536 ntBASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.45□□□□□ -0.1
ANKRD55Q3KP44 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 SEC1P-202ENST00000473944 940 ntBASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 REXO1L10P-201ENST00000615707 1290 ntBASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 REXO1L12P-201ENST00000622156 912 ntBASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ANKRD55Q3KP44 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.43□□□□□ -0.1
ANKRD55Q3KP44 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ANKRD55Q3KP44 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms