Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 AC004967.1-201ENST00000453589 447 ntBASIC18.84■□□□□ 0.61
CDC42EP1Q00587 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 AL513190.1-201ENST00000621254 727 ntBASIC18.84■□□□□ 0.61
CDC42EP1Q00587 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42EP1Q00587 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.83■□□□□ 0.61
CDC42EP1Q00587 AC025580.3-201ENST00000617932 1424 ntBASIC18.83■□□□□ 0.61
CDC42EP1Q00587 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.83■□□□□ 0.61
CDC42EP1Q00587 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDC42EP1Q00587 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDC42EP1Q00587 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDC42EP1Q00587 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
CDC42EP1Q00587 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.83■□□□□ 0.61
CDC42EP1Q00587 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDC42EP1Q00587 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDC42EP1Q00587 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.61
CDC42EP1Q00587 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDC42EP1Q00587 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42EP1Q00587 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 AL138688.1-201ENST00000624851 1594 ntBASIC18.82■□□□□ 0.6
CDC42EP1Q00587 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 HTR5BP-201ENST00000430851 1154 ntBASIC18.82■□□□□ 0.6
CDC42EP1Q00587 AP006288.1-201ENST00000446065 395 ntBASIC18.82■□□□□ 0.6
CDC42EP1Q00587 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 SLC25A6P2-201ENST00000497974 877 ntBASIC18.82■□□□□ 0.6
CDC42EP1Q00587 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP1Q00587 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms