Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 CICP6-201ENST00000457191 2729 ntBASIC19.49■□□□□ 0.71
TPM4P67936 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.49■□□□□ 0.71
TPM4P67936 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TPM4P67936 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM4P67936 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM4P67936 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM4P67936 HMGA1P5-201ENST00000412453 271 ntBASIC19.48■□□□□ 0.71
TPM4P67936 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.48■□□□□ 0.71
TPM4P67936 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM4P67936 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.48■□□□□ 0.71
TPM4P67936 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM4P67936 AL603756.1-201ENST00000606511 2163 ntBASIC19.48■□□□□ 0.71
TPM4P67936 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.48■□□□□ 0.71
TPM4P67936 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.48■□□□□ 0.71
TPM4P67936 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TPM4P67936 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM4P67936 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TPM4P67936 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM4P67936 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM4P67936 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM4P67936 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM4P67936 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM4P67936 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM4P67936 INGX-201ENST00000359239 846 ntBASIC19.47■□□□□ 0.71
TPM4P67936 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TPM4P67936 TSPY7P-201ENST00000431358 1114 ntBASIC19.47■□□□□ 0.71
TPM4P67936 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.47■□□□□ 0.71
TPM4P67936 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.47■□□□□ 0.71
TPM4P67936 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.47■□□□□ 0.71
TPM4P67936 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.47■□□□□ 0.71
TPM4P67936 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM4P67936 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM4P67936 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.47■□□□□ 0.71
TPM4P67936 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TPM4P67936 AC093525.9-201ENST00000624961 1746 ntBASIC19.47■□□□□ 0.71
TPM4P67936 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.47■□□□□ 0.71
TPM4P67936 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM4P67936 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TPM4P67936 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM4P67936 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM4P67936 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM4P67936 AL356309.3-201ENST00000624132 1934 ntBASIC19.47■□□□□ 0.71
TPM4P67936 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM4P67936 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM4P67936 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM4P67936 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM4P67936 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 AC046185.3-201ENST00000623228 1824 ntBASIC19.46■□□□□ 0.71
TPM4P67936 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.46■□□□□ 0.71
TPM4P67936 DOC2GP-204ENST00000639052 2548 ntBASIC19.46■□□□□ 0.71
TPM4P67936 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.46■□□□□ 0.71
TPM4P67936 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
TPM4P67936 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TPM4P67936 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.46■□□□□ 0.71
TPM4P67936 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.46■□□□□ 0.71
TPM4P67936 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.46■□□□□ 0.71
TPM4P67936 AC002558.1-201ENST00000488906 803 ntBASIC19.46■□□□□ 0.71
TPM4P67936 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 NAPSB-206ENST00000562112 1266 ntBASIC19.46■□□□□ 0.71
TPM4P67936 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.46■□□□□ 0.71
TPM4P67936 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.46■□□□□ 0.71
TPM4P67936 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms