Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P62891 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P62891 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P62891 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RPL39P62891 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RPL39P62891 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P62891 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RPL39P62891 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P62891 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P62891 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P62891 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P62891 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.32□□□□□ -0.44
RPL39P62891 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.31□□□□□ -0.44
RPL39P62891 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.31□□□□□ -0.44
RPL39P62891 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
RPL39P62891 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RPL39P62891 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.31□□□□□ -0.44
RPL39P62891 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.31□□□□□ -0.44
RPL39P62891 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.31□□□□□ -0.44
RPL39P62891 MIR935-201ENST00000401179 91 ntBASIC12.31□□□□□ -0.44
RPL39P62891 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.31□□□□□ -0.44
RPL39P62891 BX088651.1-201ENST00000540551 451 ntBASIC12.31□□□□□ -0.44
RPL39P62891 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.31□□□□□ -0.44
RPL39P62891 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.31□□□□□ -0.44
RPL39P62891 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
RPL39P62891 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RPL39P62891 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RPL39P62891 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 BX276092.7-203ENST00000637198 1536 ntBASIC12.31□□□□□ -0.44
RPL39P62891 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.31□□□□□ -0.44
RPL39P62891 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P62891 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.3□□□□□ -0.44
RPL39P62891 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.3□□□□□ -0.44
RPL39P62891 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.3□□□□□ -0.44
RPL39P62891 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RPL39P62891 AC092338.2-201ENST00000568827 1415 ntBASIC12.3□□□□□ -0.44
RPL39P62891 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
RPL39P62891 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.3□□□□□ -0.44
RPL39P62891 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RPL39P62891 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.3□□□□□ -0.44
RPL39P62891 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RPL39P62891 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
RPL39P62891 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.3□□□□□ -0.44
RPL39P62891 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.3□□□□□ -0.44
RPL39P62891 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.3□□□□□ -0.44
RPL39P62891 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 CCR12P-201ENST00000446203 998 ntBASIC12.3□□□□□ -0.44
RPL39P62891 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.3□□□□□ -0.44
RPL39P62891 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.3□□□□□ -0.44
RPL39P62891 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.3□□□□□ -0.44
RPL39P62891 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
RPL39P62891 AL359736.2-201ENST00000621992 437 ntBASIC12.3□□□□□ -0.44
RPL39P62891 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RPL39P62891 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.3□□□□□ -0.44
RPL39P62891 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms