Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4XP62701 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4XP62701 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.68■□□□□ 0.1
RPS4XP62701 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4XP62701 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RPS4XP62701 AC099398.1-201ENST00000567919 2776 ntBASIC15.67■□□□□ 0.1
RPS4XP62701 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4XP62701 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4XP62701 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4XP62701 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4XP62701 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RPS4XP62701 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RPS4XP62701 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.67■□□□□ 0.1
RPS4XP62701 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4XP62701 AL160237.2-201ENST00000556165 472 ntBASIC15.67■□□□□ 0.1
RPS4XP62701 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.67■□□□□ 0.1
RPS4XP62701 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.67■□□□□ 0.1
RPS4XP62701 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4XP62701 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RPS4XP62701 AC011467.2-201ENST00000598425 242 ntBASIC15.67■□□□□ 0.1
RPS4XP62701 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.67■□□□□ 0.1
RPS4XP62701 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.67■□□□□ 0.1
RPS4XP62701 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4XP62701 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4XP62701 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RPS4XP62701 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4XP62701 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.67■□□□□ 0.1
RPS4XP62701 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.66■□□□□ 0.1
RPS4XP62701 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RPS4XP62701 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.66■□□□□ 0.1
RPS4XP62701 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.66■□□□□ 0.1
RPS4XP62701 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.66■□□□□ 0.1
RPS4XP62701 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.66■□□□□ 0.1
RPS4XP62701 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.66■□□□□ 0.1
RPS4XP62701 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.66■□□□□ 0.1
RPS4XP62701 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.66■□□□□ 0.1
RPS4XP62701 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.66■□□□□ 0.1
RPS4XP62701 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RPS4XP62701 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.66■□□□□ 0.1
RPS4XP62701 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.66■□□□□ 0.1
RPS4XP62701 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4XP62701 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.65■□□□□ 0.1
RPS4XP62701 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
RPS4XP62701 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.65■□□□□ 0.1
RPS4XP62701 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
RPS4XP62701 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.65■□□□□ 0.1
RPS4XP62701 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.65■□□□□ 0.1
RPS4XP62701 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.65■□□□□ 0.1
RPS4XP62701 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RPS4XP62701 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.65■□□□□ 0.1
RPS4XP62701 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.65■□□□□ 0.1
RPS4XP62701 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4XP62701 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.65■□□□□ 0.1
RPS4XP62701 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.65■□□□□ 0.1
RPS4XP62701 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RPS4XP62701 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.65■□□□□ 0.1
RPS4XP62701 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.65■□□□□ 0.1
RPS4XP62701 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.65■□□□□ 0.1
RPS4XP62701 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms