Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SNRPEP62304 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.29□□□□□ -0.28
SNRPEP62304 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SNRPEP62304 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.29□□□□□ -0.28
SNRPEP62304 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNRPEP62304 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNRPEP62304 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SNRPEP62304 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNRPEP62304 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SNRPEP62304 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SNRPEP62304 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 AC010491.1-201ENST00000563101 2797 ntBASIC13.28□□□□□ -0.28
SNRPEP62304 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SNRPEP62304 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SNRPEP62304 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SNRPEP62304 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 AC016396.2-201ENST00000562575 1417 ntBASIC13.28□□□□□ -0.28
SNRPEP62304 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.28□□□□□ -0.28
SNRPEP62304 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SNRPEP62304 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SNRPEP62304 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
SNRPEP62304 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNRPEP62304 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNRPEP62304 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.27□□□□□ -0.28
SNRPEP62304 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNRPEP62304 COL6A4P2-202ENST00000504443 2753 ntBASIC13.27□□□□□ -0.28
SNRPEP62304 AC087386.2-201ENST00000623212 4637 ntBASIC13.27□□□□□ -0.28
SNRPEP62304 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNRPEP62304 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNRPEP62304 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SNRPEP62304 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNRPEP62304 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SNRPEP62304 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SNRPEP62304 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNRPEP62304 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SNRPEP62304 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNRPEP62304 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.27□□□□□ -0.28
SNRPEP62304 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
SNRPEP62304 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.27□□□□□ -0.29
SNRPEP62304 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC13.27□□□□□ -0.29
SNRPEP62304 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.27□□□□□ -0.29
SNRPEP62304 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SNRPEP62304 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
SNRPEP62304 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SNRPEP62304 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.27□□□□□ -0.29
SNRPEP62304 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 KRT8P9-201ENST00000558927 1449 ntBASIC13.27□□□□□ -0.29
SNRPEP62304 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SNRPEP62304 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.27□□□□□ -0.29
SNRPEP62304 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
SNRPEP62304 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.27□□□□□ -0.29
SNRPEP62304 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNRPEP62304 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SNRPEP62304 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.26□□□□□ -0.29
SNRPEP62304 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNRPEP62304 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms