Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LMO4P61968 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 AL390961.4-201ENST00000623958 2535 ntBASIC14.18□□□□□ -0.14
LMO4P61968 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LMO4P61968 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO4P61968 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO4P61968 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.17□□□□□ -0.14
LMO4P61968 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LMO4P61968 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO4P61968 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.17□□□□□ -0.14
LMO4P61968 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LMO4P61968 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.17□□□□□ -0.14
LMO4P61968 AC027796.2-201ENST00000575326 344 ntBASIC14.17□□□□□ -0.14
LMO4P61968 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LMO4P61968 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.17□□□□□ -0.14
LMO4P61968 BCL2-203ENST00000589955 5011 ntBASIC14.17□□□□□ -0.14
LMO4P61968 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO4P61968 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO4P61968 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LMO4P61968 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LMO4P61968 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LMO4P61968 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LMO4P61968 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 AC008764.6-201ENST00000595909 2069 ntBASIC14.16□□□□□ -0.14
LMO4P61968 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO4P61968 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LMO4P61968 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LMO4P61968 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LMO4P61968 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
LMO4P61968 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
LMO4P61968 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.16□□□□□ -0.14
LMO4P61968 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LMO4P61968 AC107918.2-201ENST00000530817 355 ntBASIC14.16□□□□□ -0.14
LMO4P61968 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LMO4P61968 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LMO4P61968 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO4P61968 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LMO4P61968 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO4P61968 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LMO4P61968 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LMO4P61968 AC092919.2-201ENST00000623631 1645 ntBASIC14.15□□□□□ -0.14
LMO4P61968 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LMO4P61968 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO4P61968 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO4P61968 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LMO4P61968 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
LMO4P61968 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO4P61968 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
LMO4P61968 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LMO4P61968 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO4P61968 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms