Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB38P57729 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB38P57729 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB38P57729 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAB38P57729 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB38P57729 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RAB38P57729 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 RPS2P28-201ENST00000314255 741 ntBASIC16.3■□□□□ 0.2
RAB38P57729 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB38P57729 SLC25A1P3-201ENST00000395415 828 ntBASIC16.3■□□□□ 0.2
RAB38P57729 MRPL3P1-201ENST00000400109 1033 ntBASIC16.3■□□□□ 0.2
RAB38P57729 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.3■□□□□ 0.2
RAB38P57729 HNRNPDP1-201ENST00000439535 754 ntBASIC16.3■□□□□ 0.2
RAB38P57729 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.3■□□□□ 0.2
RAB38P57729 AC006557.2-201ENST00000592985 1240 ntBASIC16.3■□□□□ 0.2
RAB38P57729 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 AC004706.3-202ENST00000621574 984 ntBASIC16.3■□□□□ 0.2
RAB38P57729 AC148477.8-201ENST00000624298 468 ntBASIC16.3■□□□□ 0.2
RAB38P57729 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB38P57729 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 AC093525.9-201ENST00000624961 1746 ntBASIC16.3■□□□□ 0.2
RAB38P57729 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB38P57729 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAB38P57729 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB38P57729 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB38P57729 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB38P57729 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB38P57729 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB38P57729 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB38P57729 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 AC009078.2-202ENST00000463353 338 ntBASIC16.29■□□□□ 0.2
RAB38P57729 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
RAB38P57729 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB38P57729 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.29■□□□□ 0.2
RAB38P57729 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB38P57729 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB38P57729 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB38P57729 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB38P57729 SLC25A6P4-201ENST00000586535 553 ntBASIC16.29■□□□□ 0.2
RAB38P57729 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAB38P57729 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB38P57729 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAB38P57729 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RAB38P57729 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 AC139713.2-201ENST00000641328 2723 ntBASIC16.29■□□□□ 0.2
RAB38P57729 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RAB38P57729 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAB38P57729 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB38P57729 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB38P57729 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB38P57729 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB38P57729 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB38P57729 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB38P57729 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB38P57729 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB38P57729 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB38P57729 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 AL031284.1-201ENST00000419297 478 ntBASIC16.28■□□□□ 0.2
RAB38P57729 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
RAB38P57729 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB38P57729 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB38P57729 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB38P57729 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB38P57729 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB38P57729 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms