Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
CDH11P55287 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CDH11P55287 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH11P55287 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH11P55287 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
CDH11P55287 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH11P55287 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH11P55287 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH11P55287 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH11P55287 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH11P55287 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH11P55287 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CDH11P55287 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
CDH11P55287 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH11P55287 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.93■□□□□ 0.14
CDH11P55287 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH11P55287 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.93■□□□□ 0.14
CDH11P55287 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDH11P55287 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH11P55287 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH11P55287 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH11P55287 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH11P55287 UBALD1-205ENST00000590891 2641 ntBASIC15.93■□□□□ 0.14
CDH11P55287 AC016396.2-201ENST00000562575 1417 ntBASIC15.93■□□□□ 0.14
CDH11P55287 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
CDH11P55287 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
CDH11P55287 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CDH11P55287 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDH11P55287 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 MIR662-201ENST00000384847 95 ntBASIC15.92■□□□□ 0.14
CDH11P55287 DUSP5P1-201ENST00000441325 1139 ntBASIC15.92■□□□□ 0.14
CDH11P55287 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH11P55287 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CDH11P55287 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
CDH11P55287 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
CDH11P55287 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CDH11P55287 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CDH11P55287 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH11P55287 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH11P55287 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CDH11P55287 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 PVRIG2P-201ENST00000435460 978 ntBASIC15.91■□□□□ 0.14
CDH11P55287 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 KRT8P26-201ENST00000534154 1276 ntBASIC15.91■□□□□ 0.14
CDH11P55287 AC092329.2-201ENST00000598402 547 ntBASIC15.91■□□□□ 0.14
CDH11P55287 NPAP1P7-201ENST00000613027 823 ntBASIC15.91■□□□□ 0.14
CDH11P55287 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH11P55287 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH11P55287 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH11P55287 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH11P55287 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH11P55287 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms