Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CROCCP2-202ENST00000412962 2773 ntBASIC16.3■□□□□ 0.2
SMSP52788 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
SMSP52788 AC100803.2-201ENST00000562459 1963 ntBASIC16.3■□□□□ 0.2
SMSP52788 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SMSP52788 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.3■□□□□ 0.2
SMSP52788 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SMSP52788 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.3■□□□□ 0.2
SMSP52788 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.3■□□□□ 0.2
SMSP52788 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SMSP52788 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.3■□□□□ 0.2
SMSP52788 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.3■□□□□ 0.2
SMSP52788 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.3■□□□□ 0.2
SMSP52788 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.3■□□□□ 0.2
SMSP52788 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SMSP52788 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SMSP52788 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SMSP52788 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.3■□□□□ 0.2
SMSP52788 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
SMSP52788 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.29■□□□□ 0.2
SMSP52788 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SMSP52788 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 AKR1C7P-201ENST00000305623 895 ntBASIC16.29■□□□□ 0.2
SMSP52788 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.29■□□□□ 0.2
SMSP52788 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 KRT18P13-201ENST00000400056 1290 ntBASIC16.29■□□□□ 0.2
SMSP52788 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 AF186996.4-201ENST00000467186 377 ntBASIC16.29■□□□□ 0.2
SMSP52788 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.29■□□□□ 0.2
SMSP52788 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.29■□□□□ 0.2
SMSP52788 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.29■□□□□ 0.2
SMSP52788 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SMSP52788 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.29■□□□□ 0.2
SMSP52788 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.29■□□□□ 0.2
SMSP52788 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.29■□□□□ 0.2
SMSP52788 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 AC132938.6-201ENST00000623828 1655 ntBASIC16.29■□□□□ 0.2
SMSP52788 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.29■□□□□ 0.2
SMSP52788 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
SMSP52788 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SMSP52788 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMSP52788 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.29■□□□□ 0.2
SMSP52788 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.28■□□□□ 0.2
SMSP52788 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 AC124067.4-201ENST00000519691 2379 ntBASIC16.28■□□□□ 0.2
SMSP52788 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.28■□□□□ 0.2
SMSP52788 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SMSP52788 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SMSP52788 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms