Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP11P51784 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
USP11P51784 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.58■□□□□ 0.72
USP11P51784 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.57■□□□□ 0.72
USP11P51784 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.57■□□□□ 0.72
USP11P51784 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.57■□□□□ 0.72
USP11P51784 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.57■□□□□ 0.72
USP11P51784 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.57■□□□□ 0.72
USP11P51784 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
USP11P51784 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
USP11P51784 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
USP11P51784 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.57■□□□□ 0.72
USP11P51784 PTCHD3P3-201ENST00000403073 906 ntBASIC19.57■□□□□ 0.72
USP11P51784 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.57■□□□□ 0.72
USP11P51784 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.57■□□□□ 0.72
USP11P51784 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.57■□□□□ 0.72
USP11P51784 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.57■□□□□ 0.72
USP11P51784 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.57■□□□□ 0.72
USP11P51784 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.57■□□□□ 0.72
USP11P51784 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.57■□□□□ 0.72
USP11P51784 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.57■□□□□ 0.72
USP11P51784 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
USP11P51784 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.57■□□□□ 0.72
USP11P51784 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP11P51784 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP11P51784 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP11P51784 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP11P51784 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP11P51784 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP11P51784 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.56■□□□□ 0.72
USP11P51784 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP11P51784 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP11P51784 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.56■□□□□ 0.72
USP11P51784 AP002414.1-201ENST00000391405 1147 ntBASIC19.56■□□□□ 0.72
USP11P51784 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.56■□□□□ 0.72
USP11P51784 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP11P51784 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.56■□□□□ 0.72
USP11P51784 AC098831.1-202ENST00000438821 336 ntBASIC19.56■□□□□ 0.72
USP11P51784 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.56■□□□□ 0.72
USP11P51784 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.56■□□□□ 0.72
USP11P51784 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.56■□□□□ 0.72
USP11P51784 AC005593.1-201ENST00000624894 515 ntBASIC19.56■□□□□ 0.72
USP11P51784 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.56■□□□□ 0.72
USP11P51784 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP11P51784 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.56■□□□□ 0.72
USP11P51784 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.56■□□□□ 0.72
USP11P51784 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 EGFEM1P-202ENST00000431685 1563 ntBASIC19.56■□□□□ 0.72
USP11P51784 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
USP11P51784 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP11P51784 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP11P51784 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.56■□□□□ 0.72
USP11P51784 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP11P51784 IL9RP2-201ENST00000423948 1312 ntBASIC19.55■□□□□ 0.72
USP11P51784 AL023806.1-201ENST00000603994 1649 ntBASIC19.55■□□□□ 0.72
USP11P51784 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
USP11P51784 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP11P51784 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP11P51784 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP11P51784 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP11P51784 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.55■□□□□ 0.72
USP11P51784 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.55■□□□□ 0.72
USP11P51784 AL590627.1-203ENST00000421194 1026 ntBASIC19.55■□□□□ 0.72
USP11P51784 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.55■□□□□ 0.72
USP11P51784 RPS15P9-201ENST00000494093 319 ntBASIC19.55■□□□□ 0.72
USP11P51784 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP11P51784 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.55■□□□□ 0.72
USP11P51784 TERC-201ENST00000602385 541 ntBASIC19.55■□□□□ 0.72
USP11P51784 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
USP11P51784 AC008667.4-201ENST00000607370 168 ntBASIC19.55■□□□□ 0.72
USP11P51784 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.55■□□□□ 0.72
USP11P51784 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
USP11P51784 AC117500.6-201ENST00000624871 588 ntBASIC19.55■□□□□ 0.72
USP11P51784 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
USP11P51784 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms