Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.56■□□□□ 0.24
PRIM2P49643 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.55■□□□□ 0.24
PRIM2P49643 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.55■□□□□ 0.24
PRIM2P49643 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
PRIM2P49643 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PRIM2P49643 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.55■□□□□ 0.24
PRIM2P49643 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.55■□□□□ 0.24
PRIM2P49643 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRIM2P49643 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PRIM2P49643 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.55■□□□□ 0.24
PRIM2P49643 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.55■□□□□ 0.24
PRIM2P49643 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.55■□□□□ 0.24
PRIM2P49643 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.55■□□□□ 0.24
PRIM2P49643 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PRIM2P49643 AC090616.6-201ENST00000582640 721 ntBASIC16.55■□□□□ 0.24
PRIM2P49643 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.55■□□□□ 0.24
PRIM2P49643 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.55■□□□□ 0.24
PRIM2P49643 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.55■□□□□ 0.24
PRIM2P49643 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.55■□□□□ 0.24
PRIM2P49643 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.55■□□□□ 0.24
PRIM2P49643 AL590326.2-201ENST00000625139 305 ntBASIC16.55■□□□□ 0.24
PRIM2P49643 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PRIM2P49643 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.55■□□□□ 0.24
PRIM2P49643 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRIM2P49643 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PRIM2P49643 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PRIM2P49643 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.54■□□□□ 0.24
PRIM2P49643 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 AC016396.2-201ENST00000562575 1417 ntBASIC16.54■□□□□ 0.24
PRIM2P49643 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.54■□□□□ 0.24
PRIM2P49643 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.54■□□□□ 0.24
PRIM2P49643 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PRIM2P49643 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 KRT8P26-201ENST00000534154 1276 ntBASIC16.54■□□□□ 0.24
PRIM2P49643 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
PRIM2P49643 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.54■□□□□ 0.24
PRIM2P49643 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.54■□□□□ 0.24
PRIM2P49643 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PRIM2P49643 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PRIM2P49643 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
PRIM2P49643 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.54■□□□□ 0.24
PRIM2P49643 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PRIM2P49643 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PRIM2P49643 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRIM2P49643 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRIM2P49643 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRIM2P49643 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRIM2P49643 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PRIM2P49643 NKILA-202ENST00000614771 2598 ntBASIC16.53■□□□□ 0.24
PRIM2P49643 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PRIM2P49643 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRIM2P49643 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRIM2P49643 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRIM2P49643 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.53■□□□□ 0.24
PRIM2P49643 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRIM2P49643 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRIM2P49643 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.53■□□□□ 0.24
PRIM2P49643 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRIM2P49643 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRIM2P49643 AL031133.1-201ENST00000406807 723 ntBASIC16.53■□□□□ 0.24
PRIM2P49643 AC096633.1-201ENST00000422446 749 ntBASIC16.53■□□□□ 0.24
PRIM2P49643 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.53■□□□□ 0.24
PRIM2P49643 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRIM2P49643 IGHV3-41-201ENST00000613121 348 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms