Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.08■□□□□ 0.16
HTR3AP46098 PCDHA1-201ENST00000378133 2726 ntBASIC16.08■□□□□ 0.16
HTR3AP46098 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR3AP46098 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR3AP46098 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.08■□□□□ 0.16
HTR3AP46098 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.08■□□□□ 0.16
HTR3AP46098 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.07■□□□□ 0.16
HTR3AP46098 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.07■□□□□ 0.16
HTR3AP46098 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HTR3AP46098 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 COX5BP2-201ENST00000392354 334 ntBASIC16.07■□□□□ 0.16
HTR3AP46098 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 Z69720.1-201ENST00000601483 472 ntBASIC16.07■□□□□ 0.16
HTR3AP46098 AC069148.1-201ENST00000608741 768 ntBASIC16.07■□□□□ 0.16
HTR3AP46098 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.07■□□□□ 0.16
HTR3AP46098 AL358472.4-201ENST00000633140 710 ntBASIC16.07■□□□□ 0.16
HTR3AP46098 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.07■□□□□ 0.16
HTR3AP46098 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.07■□□□□ 0.16
HTR3AP46098 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.07■□□□□ 0.16
HTR3AP46098 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.07■□□□□ 0.16
HTR3AP46098 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 LINC00304-203ENST00000565008 1864 ntBASIC16.07■□□□□ 0.16
HTR3AP46098 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.07■□□□□ 0.16
HTR3AP46098 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
HTR3AP46098 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 AL355312.1-201ENST00000407115 2176 ntBASIC16.07■□□□□ 0.16
HTR3AP46098 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.07■□□□□ 0.16
HTR3AP46098 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.07■□□□□ 0.16
HTR3AP46098 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.07■□□□□ 0.16
HTR3AP46098 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.07■□□□□ 0.16
HTR3AP46098 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HTR3AP46098 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.07■□□□□ 0.16
HTR3AP46098 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
HTR3AP46098 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.06■□□□□ 0.16
HTR3AP46098 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HTR3AP46098 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.06■□□□□ 0.16
HTR3AP46098 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.06■□□□□ 0.16
HTR3AP46098 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.06■□□□□ 0.16
HTR3AP46098 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.06■□□□□ 0.16
HTR3AP46098 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HTR3AP46098 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 AC005104.2-201ENST00000427818 678 ntBASIC16.06■□□□□ 0.16
HTR3AP46098 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.06■□□□□ 0.16
HTR3AP46098 AC009533.2-201ENST00000543664 586 ntBASIC16.06■□□□□ 0.16
HTR3AP46098 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
HTR3AP46098 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.06■□□□□ 0.16
HTR3AP46098 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.06■□□□□ 0.16
HTR3AP46098 AL138831.2-201ENST00000606564 490 ntBASIC16.06■□□□□ 0.16
HTR3AP46098 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.06■□□□□ 0.16
HTR3AP46098 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.06■□□□□ 0.16
HTR3AP46098 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.06■□□□□ 0.16
HTR3AP46098 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.06■□□□□ 0.16
HTR3AP46098 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.06■□□□□ 0.16
HTR3AP46098 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
HTR3AP46098 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HTR3AP46098 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR3AP46098 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms