Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 FAM86EP-206ENST00000510506 987 ntBASIC18.18■□□□□ 0.5
SLC1A1P43005 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC1A1P43005 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 AC005915.1-201ENST00000624912 2018 ntBASIC18.18■□□□□ 0.5
SLC1A1P43005 AL135999.2-201ENST00000622438 1686 ntBASIC18.18■□□□□ 0.5
SLC1A1P43005 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A1P43005 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC1A1P43005 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A1P43005 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A1P43005 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SLC1A1P43005 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A1P43005 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC1A1P43005 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC1A1P43005 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A1P43005 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A1P43005 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC1A1P43005 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A1P43005 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC1A1P43005 AC091607.1-201ENST00000490318 1060 ntBASIC18.17■□□□□ 0.5
SLC1A1P43005 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC1A1P43005 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A1P43005 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A1P43005 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SLC1A1P43005 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A1P43005 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A1P43005 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A1P43005 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A1P43005 AC132938.5-201ENST00000624980 1813 ntBASIC18.16■□□□□ 0.5
SLC1A1P43005 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A1P43005 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A1P43005 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC1A1P43005 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A1P43005 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SLC1A1P43005 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SLC1A1P43005 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC1A1P43005 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A1P43005 AP005901.3-202ENST00000581653 237 ntBASIC18.16■□□□□ 0.5
SLC1A1P43005 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLC1A1P43005 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A1P43005 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A1P43005 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A1P43005 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A1P43005 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A1P43005 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A1P43005 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A1P43005 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A1P43005 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 AL118508.1-201ENST00000613502 2345 ntBASIC18.15■□□□□ 0.5
SLC1A1P43005 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.15■□□□□ 0.5
SLC1A1P43005 Z69720.1-201ENST00000601483 472 ntBASIC18.15■□□□□ 0.5
SLC1A1P43005 AC116407.4-201ENST00000623319 1061 ntBASIC18.15■□□□□ 0.5
SLC1A1P43005 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A1P43005 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A1P43005 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A1P43005 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A1P43005 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms