Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC1A3P43003 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC1A3P43003 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC1A3P43003 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC1A3P43003 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SLC1A3P43003 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC1A3P43003 KRT17P6-201ENST00000453795 1220 ntBASIC15.99■□□□□ 0.15
SLC1A3P43003 IGHV3-52-201ENST00000519770 353 ntBASIC15.99■□□□□ 0.15
SLC1A3P43003 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
SLC1A3P43003 MIR3180-1-201ENST00000580374 94 ntBASIC15.99■□□□□ 0.15
SLC1A3P43003 MIR3180-3-201ENST00000584616 94 ntBASIC15.99■□□□□ 0.15
SLC1A3P43003 AL139327.4-201ENST00000612362 153 ntBASIC15.99■□□□□ 0.15
SLC1A3P43003 NPAP1P7-201ENST00000613027 823 ntBASIC15.99■□□□□ 0.15
SLC1A3P43003 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC1A3P43003 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SLC1A3P43003 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
SLC1A3P43003 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A3P43003 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC1A3P43003 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SLC1A3P43003 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC1A3P43003 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC1A3P43003 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SLC1A3P43003 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SLC1A3P43003 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
SLC1A3P43003 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
SLC1A3P43003 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SLC1A3P43003 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC1A3P43003 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.98■□□□□ 0.15
SLC1A3P43003 LINC00265-3P-201ENST00000447588 903 ntBASIC15.98■□□□□ 0.15
SLC1A3P43003 MINOS1P3-201ENST00000457048 203 ntBASIC15.98■□□□□ 0.15
SLC1A3P43003 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC1A3P43003 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC1A3P43003 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC1A3P43003 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.98■□□□□ 0.15
SLC1A3P43003 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC1A3P43003 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC1A3P43003 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC1A3P43003 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
SLC1A3P43003 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.98■□□□□ 0.15
SLC1A3P43003 AC011467.2-201ENST00000598425 242 ntBASIC15.98■□□□□ 0.15
SLC1A3P43003 AC019129.2-201ENST00000609837 1235 ntBASIC15.98■□□□□ 0.15
SLC1A3P43003 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SLC1A3P43003 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SLC1A3P43003 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC1A3P43003 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SLC1A3P43003 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A3P43003 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A3P43003 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A3P43003 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SLC1A3P43003 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A3P43003 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A3P43003 AC016396.2-201ENST00000562575 1417 ntBASIC15.97■□□□□ 0.15
SLC1A3P43003 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A3P43003 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC1A3P43003 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A3P43003 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC1A3P43003 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A3P43003 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC1A3P43003 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SLC1A3P43003 ATP5G2P1-201ENST00000433580 426 ntBASIC15.97■□□□□ 0.15
SLC1A3P43003 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A3P43003 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SLC1A3P43003 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC1A3P43003 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC1A3P43003 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC1A3P43003 AC111152.3-201ENST00000569699 673 ntBASIC15.97■□□□□ 0.15
SLC1A3P43003 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC1A3P43003 AC109462.3-201ENST00000573934 613 ntBASIC15.97■□□□□ 0.15
SLC1A3P43003 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC1A3P43003 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A3P43003 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms