Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSP1P33241 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSP1P33241 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSP1P33241 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LSP1P33241 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.45■□□□□ 0.38
LSP1P33241 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.45■□□□□ 0.38
LSP1P33241 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 AL031985.4-201ENST00000642138 673 ntBASIC17.45■□□□□ 0.38
LSP1P33241 AC099063.4-201ENST00000641099 1602 ntBASIC17.45■□□□□ 0.38
LSP1P33241 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.45■□□□□ 0.38
LSP1P33241 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LSP1P33241 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.45■□□□□ 0.38
LSP1P33241 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LSP1P33241 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSP1P33241 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSP1P33241 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.45■□□□□ 0.38
LSP1P33241 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.45■□□□□ 0.38
LSP1P33241 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.45■□□□□ 0.38
LSP1P33241 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSP1P33241 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
LSP1P33241 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.44■□□□□ 0.38
LSP1P33241 HLA-A-202ENST00000376806 1854 ntBASIC17.44■□□□□ 0.38
LSP1P33241 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LSP1P33241 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LSP1P33241 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LSP1P33241 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.44■□□□□ 0.38
LSP1P33241 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LSP1P33241 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.44■□□□□ 0.38
LSP1P33241 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 CD99P1-205ENST00000527459 561 ntBASIC17.44■□□□□ 0.38
LSP1P33241 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.44■□□□□ 0.38
LSP1P33241 AC104390.1-201ENST00000555663 520 ntBASIC17.44■□□□□ 0.38
LSP1P33241 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.44■□□□□ 0.38
LSP1P33241 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LSP1P33241 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 KRT16P1-201ENST00000399124 1418 ntBASIC17.44■□□□□ 0.38
LSP1P33241 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.44■□□□□ 0.38
LSP1P33241 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.44■□□□□ 0.38
LSP1P33241 MTHFR-217ENST00000641820 1569 ntBASIC17.44■□□□□ 0.38
LSP1P33241 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.44■□□□□ 0.38
LSP1P33241 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSP1P33241 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.44■□□□□ 0.38
LSP1P33241 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LSP1P33241 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LSP1P33241 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LSP1P33241 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.43■□□□□ 0.38
LSP1P33241 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.43■□□□□ 0.38
LSP1P33241 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LSP1P33241 KRASP1-201ENST00000407852 552 ntBASIC17.43■□□□□ 0.38
LSP1P33241 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LSP1P33241 AP002982.1-201ENST00000492365 877 ntBASIC17.43■□□□□ 0.38
LSP1P33241 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
LSP1P33241 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.43■□□□□ 0.38
LSP1P33241 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.43■□□□□ 0.38
LSP1P33241 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LSP1P33241 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.43■□□□□ 0.38
LSP1P33241 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.43■□□□□ 0.38
LSP1P33241 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
LSP1P33241 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.43■□□□□ 0.38
LSP1P33241 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.43■□□□□ 0.38
LSP1P33241 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSP1P33241 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms