Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P31025 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LCN1P31025 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
LCN1P31025 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.09■□□□□ 0.17
LCN1P31025 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LCN1P31025 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LCN1P31025 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LCN1P31025 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LCN1P31025 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 ABCD1P5-201ENST00000445663 754 ntBASIC16.09■□□□□ 0.17
LCN1P31025 STK19B-204ENST00000512515 211 ntBASIC16.09■□□□□ 0.17
LCN1P31025 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.09■□□□□ 0.17
LCN1P31025 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
LCN1P31025 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.09■□□□□ 0.17
LCN1P31025 AC073592.5-201ENST00000624854 528 ntBASIC16.09■□□□□ 0.17
LCN1P31025 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.09■□□□□ 0.17
LCN1P31025 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.09■□□□□ 0.17
LCN1P31025 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.09■□□□□ 0.17
LCN1P31025 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LCN1P31025 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 AC009336.1-201ENST00000608941 1553 ntBASIC16.09■□□□□ 0.17
LCN1P31025 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P31025 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LCN1P31025 AL023806.1-201ENST00000603994 1649 ntBASIC16.08■□□□□ 0.17
LCN1P31025 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCN1P31025 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCN1P31025 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
LCN1P31025 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LCN1P31025 AC046185.3-201ENST00000623228 1824 ntBASIC16.08■□□□□ 0.17
LCN1P31025 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCN1P31025 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.08■□□□□ 0.17
LCN1P31025 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LCN1P31025 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.08■□□□□ 0.16
LCN1P31025 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.08■□□□□ 0.16
LCN1P31025 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.08■□□□□ 0.16
LCN1P31025 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LCN1P31025 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.08■□□□□ 0.16
LCN1P31025 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 KLF4P1-201ENST00000412782 1185 ntBASIC16.08■□□□□ 0.16
LCN1P31025 NUS1P2-201ENST00000417358 873 ntBASIC16.08■□□□□ 0.16
LCN1P31025 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
LCN1P31025 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.08■□□□□ 0.16
LCN1P31025 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.08■□□□□ 0.16
LCN1P31025 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
LCN1P31025 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.08■□□□□ 0.16
LCN1P31025 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.08■□□□□ 0.16
LCN1P31025 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.08■□□□□ 0.16
LCN1P31025 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.08■□□□□ 0.16
LCN1P31025 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.08■□□□□ 0.16
LCN1P31025 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.08■□□□□ 0.16
LCN1P31025 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LCN1P31025 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.08■□□□□ 0.16
LCN1P31025 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P31025 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.08■□□□□ 0.16
LCN1P31025 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.07■□□□□ 0.16
LCN1P31025 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P31025 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LCN1P31025 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.07■□□□□ 0.16
LCN1P31025 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P31025 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P31025 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P31025 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P31025 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P31025 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.07■□□□□ 0.16
LCN1P31025 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P31025 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.07■□□□□ 0.16
LCN1P31025 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.07■□□□□ 0.16
LCN1P31025 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P31025 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms