Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ATP4AP20648 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP4AP20648 PAWRP1-201ENST00000451083 565 ntBASIC19.21■□□□□ 0.67
ATP4AP20648 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP4AP20648 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.21■□□□□ 0.67
ATP4AP20648 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.21■□□□□ 0.67
ATP4AP20648 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.21■□□□□ 0.67
ATP4AP20648 AC018845.2-201ENST00000568326 409 ntBASIC19.21■□□□□ 0.67
ATP4AP20648 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP4AP20648 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.21■□□□□ 0.67
ATP4AP20648 AC067852.2-201ENST00000590513 2313 ntBASIC19.21■□□□□ 0.67
ATP4AP20648 PI4KAP1-204ENST00000612579 1703 ntBASIC19.21■□□□□ 0.67
ATP4AP20648 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP4AP20648 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ATP4AP20648 AC068880.1-201ENST00000507289 2297 ntBASIC19.21■□□□□ 0.67
ATP4AP20648 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP4AP20648 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP4AP20648 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
ATP4AP20648 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP4AP20648 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP4AP20648 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP4AP20648 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ATP4AP20648 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATP4AP20648 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP4AP20648 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP4AP20648 MRPL20P1-201ENST00000400819 433 ntBASIC19.2■□□□□ 0.66
ATP4AP20648 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATP4AP20648 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP4AP20648 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP4AP20648 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP4AP20648 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP4AP20648 GGTLC5P-201ENST00000617623 998 ntBASIC19.2■□□□□ 0.66
ATP4AP20648 AC055717.3-201ENST00000622967 595 ntBASIC19.2■□□□□ 0.66
ATP4AP20648 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP4AP20648 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ATP4AP20648 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP4AP20648 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP4AP20648 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP4AP20648 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATP4AP20648 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP4AP20648 RPSAP43-201ENST00000402237 625 ntBASIC19.19■□□□□ 0.66
ATP4AP20648 AC004832.2-201ENST00000426397 482 ntBASIC19.19■□□□□ 0.66
ATP4AP20648 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP4AP20648 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP4AP20648 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP4AP20648 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP4AP20648 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP4AP20648 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP4AP20648 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP4AP20648 AC010654.1-201ENST00000615722 808 ntBASIC19.19■□□□□ 0.66
ATP4AP20648 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP4AP20648 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP4AP20648 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP4AP20648 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
ATP4AP20648 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP4AP20648 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP4AP20648 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP4AP20648 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP4AP20648 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP4AP20648 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATP4AP20648 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP4AP20648 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP4AP20648 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP4AP20648 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP4AP20648 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP4AP20648 AC106820.2-201ENST00000563775 3264 ntBASIC19.18■□□□□ 0.66
ATP4AP20648 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP4AP20648 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP4AP20648 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP4AP20648 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP4AP20648 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP4AP20648 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP4AP20648 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ATP4AP20648 AC112482.1-201ENST00000492080 688 ntBASIC19.18■□□□□ 0.66
ATP4AP20648 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP4AP20648 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.18■□□□□ 0.66
ATP4AP20648 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP4AP20648 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP4AP20648 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP4AP20648 AL513190.1-201ENST00000621254 727 ntBASIC19.18■□□□□ 0.66
ATP4AP20648 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP4AP20648 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP4AP20648 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP4AP20648 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP4AP20648 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP4AP20648 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP4AP20648 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP4AP20648 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP4AP20648 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP4AP20648 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms