Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 GPR89P-201ENST00000407924 1495 ntBASIC18.36■□□□□ 0.53
PTPN1P18031 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN1P18031 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN1P18031 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN1P18031 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN1P18031 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 UNC93B6-202ENST00000528242 690 ntBASIC18.36■□□□□ 0.53
PTPN1P18031 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN1P18031 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN1P18031 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN1P18031 AL590787.1-201ENST00000568856 1315 ntBASIC18.36■□□□□ 0.53
PTPN1P18031 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN1P18031 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PTPN1P18031 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN1P18031 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN1P18031 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PTPN1P18031 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTPN1P18031 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN1P18031 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PTPN1P18031 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 PTCHD3P3-201ENST00000403073 906 ntBASIC18.35■□□□□ 0.53
PTPN1P18031 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN1P18031 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPN1P18031 AC145285.3-201ENST00000564603 959 ntBASIC18.35■□□□□ 0.53
PTPN1P18031 AC106730.1-201ENST00000566722 1090 ntBASIC18.35■□□□□ 0.53
PTPN1P18031 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN1P18031 AC090340.1-201ENST00000620778 4980 ntBASIC18.35■□□□□ 0.53
PTPN1P18031 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 LINC00896-202ENST00000609602 2128 ntBASIC18.35■□□□□ 0.53
PTPN1P18031 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN1P18031 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN1P18031 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN1P18031 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PTPN1P18031 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 AC016396.2-201ENST00000562575 1417 ntBASIC18.34■□□□□ 0.53
PTPN1P18031 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PTPN1P18031 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
PTPN1P18031 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN1P18031 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PTPN1P18031 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN1P18031 RPS15P9-201ENST00000494093 319 ntBASIC18.34■□□□□ 0.53
PTPN1P18031 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN1P18031 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PTPN1P18031 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PTPN1P18031 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PTPN1P18031 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN1P18031 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PTPN1P18031 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PTPN1P18031 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN1P18031 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.33■□□□□ 0.53
PTPN1P18031 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN1P18031 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PTPN1P18031 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN1P18031 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.33■□□□□ 0.53
PTPN1P18031 AC104109.2-201ENST00000602919 1418 ntBASIC18.33■□□□□ 0.53
PTPN1P18031 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN1P18031 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.33■□□□□ 0.53
PTPN1P18031 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.33■□□□□ 0.53
PTPN1P18031 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PTPN1P18031 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN1P18031 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN1P18031 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPN1P18031 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPN1P18031 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN1P18031 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.33■□□□□ 0.52
PTPN1P18031 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.33■□□□□ 0.52
PTPN1P18031 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.33■□□□□ 0.52
PTPN1P18031 Z83851.2-201ENST00000609564 659 ntBASIC18.33■□□□□ 0.52
PTPN1P18031 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms