Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.72■□□□□ 0.59
SYN1P17600 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SYN1P17600 AL009183.1-201ENST00000603760 355 ntBASIC18.72■□□□□ 0.59
SYN1P17600 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.72■□□□□ 0.59
SYN1P17600 SPDYE12P-201ENST00000618416 771 ntBASIC18.72■□□□□ 0.59
SYN1P17600 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYN1P17600 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SYN1P17600 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.72■□□□□ 0.59
SYN1P17600 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYN1P17600 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYN1P17600 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYN1P17600 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.71■□□□□ 0.59
SYN1P17600 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SYN1P17600 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SYN1P17600 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYN1P17600 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYN1P17600 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SYN1P17600 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.71■□□□□ 0.59
SYN1P17600 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYN1P17600 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYN1P17600 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYN1P17600 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYN1P17600 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.71■□□□□ 0.59
SYN1P17600 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SYN1P17600 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.71■□□□□ 0.59
SYN1P17600 AC092658.1-201ENST00000505836 891 ntBASIC18.71■□□□□ 0.59
SYN1P17600 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.71■□□□□ 0.59
SYN1P17600 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SYN1P17600 AP000842.3-202ENST00000569238 1080 ntBASIC18.71■□□□□ 0.59
SYN1P17600 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SYN1P17600 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.71■□□□□ 0.59
SYN1P17600 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.71■□□□□ 0.59
SYN1P17600 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SYN1P17600 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.71■□□□□ 0.59
SYN1P17600 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYN1P17600 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYN1P17600 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SYN1P17600 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
SYN1P17600 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SYN1P17600 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.7■□□□□ 0.58
SYN1P17600 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SYN1P17600 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SYN1P17600 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.7■□□□□ 0.58
SYN1P17600 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 AC079776.1-201ENST00000401540 1152 ntBASIC18.7■□□□□ 0.58
SYN1P17600 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SYN1P17600 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.7■□□□□ 0.58
SYN1P17600 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SYN1P17600 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.7■□□□□ 0.58
SYN1P17600 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.7■□□□□ 0.58
SYN1P17600 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.7■□□□□ 0.58
SYN1P17600 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.7■□□□□ 0.58
SYN1P17600 AC132938.2-201ENST00000579188 680 ntBASIC18.7■□□□□ 0.58
SYN1P17600 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.7■□□□□ 0.58
SYN1P17600 AC027307.2-201ENST00000591252 911 ntBASIC18.7■□□□□ 0.58
SYN1P17600 MIR6805-201ENST00000615055 62 ntBASIC18.7■□□□□ 0.58
SYN1P17600 AL591163.1-201ENST00000641757 987 ntBASIC18.7■□□□□ 0.58
SYN1P17600 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.7■□□□□ 0.58
SYN1P17600 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SYN1P17600 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYN1P17600 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.7■□□□□ 0.58
SYN1P17600 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SYN1P17600 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SYN1P17600 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.69■□□□□ 0.58
SYN1P17600 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYN1P17600 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYN1P17600 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.69■□□□□ 0.58
SYN1P17600 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYN1P17600 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SYN1P17600 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYN1P17600 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYN1P17600 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYN1P17600 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYN1P17600 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.69■□□□□ 0.58
SYN1P17600 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SYN1P17600 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYN1P17600 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYN1P17600 AC112492.5-201ENST00000421897 457 ntBASIC18.69■□□□□ 0.58
SYN1P17600 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
SYN1P17600 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
SYN1P17600 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYN1P17600 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.69■□□□□ 0.58
SYN1P17600 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.69■□□□□ 0.58
SYN1P17600 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.69■□□□□ 0.58
SYN1P17600 AC140912.1-201ENST00000577171 1054 ntBASIC18.69■□□□□ 0.58
SYN1P17600 AL138828.2-201ENST00000615812 383 ntBASIC18.69■□□□□ 0.58
SYN1P17600 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SYN1P17600 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms