Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.51■□□□□ 0.71
COL11A1P12107 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL11A1P12107 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.51■□□□□ 0.71
COL11A1P12107 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.51■□□□□ 0.71
COL11A1P12107 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.51■□□□□ 0.71
COL11A1P12107 MIR3909-201ENST00000579518 119 ntBASIC19.51■□□□□ 0.71
COL11A1P12107 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.51■□□□□ 0.71
COL11A1P12107 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL11A1P12107 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
COL11A1P12107 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL11A1P12107 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
COL11A1P12107 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL11A1P12107 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.5■□□□□ 0.71
COL11A1P12107 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.5■□□□□ 0.71
COL11A1P12107 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL11A1P12107 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL11A1P12107 AC002056.1-201ENST00000395613 760 ntBASIC19.5■□□□□ 0.71
COL11A1P12107 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.5■□□□□ 0.71
COL11A1P12107 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL11A1P12107 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL11A1P12107 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL11A1P12107 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL11A1P12107 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL11A1P12107 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COL11A1P12107 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL11A1P12107 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL11A1P12107 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL11A1P12107 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL11A1P12107 RNU1-129P-201ENST00000384064 167 ntBASIC19.49■□□□□ 0.71
COL11A1P12107 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.49■□□□□ 0.71
COL11A1P12107 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.49■□□□□ 0.71
COL11A1P12107 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.49■□□□□ 0.71
COL11A1P12107 U1.21-201ENST00000580816 167 ntBASIC19.49■□□□□ 0.71
COL11A1P12107 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.49■□□□□ 0.71
COL11A1P12107 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL11A1P12107 WASH6P-202ENST00000359512 1437 ntBASIC19.49■□□□□ 0.71
COL11A1P12107 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL11A1P12107 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL11A1P12107 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.49■□□□□ 0.71
COL11A1P12107 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL11A1P12107 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.49■□□□□ 0.71
COL11A1P12107 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
COL11A1P12107 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.49■□□□□ 0.71
COL11A1P12107 AL390961.4-201ENST00000623958 2535 ntBASIC19.49■□□□□ 0.71
COL11A1P12107 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.49■□□□□ 0.71
COL11A1P12107 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL11A1P12107 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL11A1P12107 FAM8A3P-201ENST00000427218 844 ntBASIC19.48■□□□□ 0.71
COL11A1P12107 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.48■□□□□ 0.71
COL11A1P12107 AC079140.1-201ENST00000508039 487 ntBASIC19.48■□□□□ 0.71
COL11A1P12107 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.48■□□□□ 0.71
COL11A1P12107 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.48■□□□□ 0.71
COL11A1P12107 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.48■□□□□ 0.71
COL11A1P12107 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 AC116353.5-201ENST00000638148 1699 ntBASIC19.48■□□□□ 0.71
COL11A1P12107 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
COL11A1P12107 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.48■□□□□ 0.71
COL11A1P12107 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.48■□□□□ 0.71
COL11A1P12107 AL592309.1-201ENST00000443127 649 ntBASIC19.48■□□□□ 0.71
COL11A1P12107 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
COL11A1P12107 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
COL11A1P12107 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.48■□□□□ 0.71
COL11A1P12107 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.48■□□□□ 0.71
COL11A1P12107 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.48■□□□□ 0.71
COL11A1P12107 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.48■□□□□ 0.71
COL11A1P12107 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL11A1P12107 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.48■□□□□ 0.71
COL11A1P12107 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL11A1P12107 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL11A1P12107 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL11A1P12107 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL11A1P12107 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL11A1P12107 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL11A1P12107 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.47■□□□□ 0.71
COL11A1P12107 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL11A1P12107 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.47■□□□□ 0.71
COL11A1P12107 RN7SL589P-201ENST00000481268 310 ntBASIC19.47■□□□□ 0.71
COL11A1P12107 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL11A1P12107 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL11A1P12107 AL353732.1-201ENST00000569618 1459 ntBASIC19.47■□□□□ 0.71
COL11A1P12107 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.47■□□□□ 0.71
COL11A1P12107 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL11A1P12107 NOC2LP1-202ENST00000452600 2235 ntBASIC19.47■□□□□ 0.71
COL11A1P12107 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL11A1P12107 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.47■□□□□ 0.71
COL11A1P12107 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL11A1P12107 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL11A1P12107 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms