Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNB1P11230 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHRNB1P11230 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNB1P11230 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNB1P11230 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNB1P11230 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNB1P11230 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CHRNB1P11230 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CHRNB1P11230 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNB1P11230 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNB1P11230 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNB1P11230 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNB1P11230 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNB1P11230 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNB1P11230 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.52■□□□□ 0.4
CHRNB1P11230 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNB1P11230 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNB1P11230 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNB1P11230 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNB1P11230 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNB1P11230 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.52■□□□□ 0.4
CHRNB1P11230 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNB1P11230 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.52■□□□□ 0.4
CHRNB1P11230 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.52■□□□□ 0.4
CHRNB1P11230 AL390955.2-201ENST00000603032 514 ntBASIC17.52■□□□□ 0.4
CHRNB1P11230 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CHRNB1P11230 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNB1P11230 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNB1P11230 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNB1P11230 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CHRNB1P11230 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.52■□□□□ 0.39
CHRNB1P11230 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.52■□□□□ 0.39
CHRNB1P11230 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNB1P11230 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CHRNB1P11230 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNB1P11230 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNB1P11230 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNB1P11230 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHRNB1P11230 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 AC002056.1-201ENST00000395613 760 ntBASIC17.51■□□□□ 0.39
CHRNB1P11230 AL627223.1-201ENST00000416693 442 ntBASIC17.51■□□□□ 0.39
CHRNB1P11230 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.51■□□□□ 0.39
CHRNB1P11230 AC244107.1-201ENST00000442033 332 ntBASIC17.51■□□□□ 0.39
CHRNB1P11230 TIMM8BP1-201ENST00000452384 211 ntBASIC17.51■□□□□ 0.39
CHRNB1P11230 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNB1P11230 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.51■□□□□ 0.39
CHRNB1P11230 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CHRNB1P11230 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.51■□□□□ 0.39
CHRNB1P11230 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.51■□□□□ 0.39
CHRNB1P11230 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNB1P11230 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNB1P11230 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 AC026120.1-201ENST00000611536 926 ntBASIC17.51■□□□□ 0.39
CHRNB1P11230 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 AC009093.7-201ENST00000623853 1223 ntBASIC17.51■□□□□ 0.39
CHRNB1P11230 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.51■□□□□ 0.39
CHRNB1P11230 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNB1P11230 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHRNB1P11230 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CHRNB1P11230 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHRNB1P11230 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNB1P11230 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.5■□□□□ 0.39
CHRNB1P11230 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNB1P11230 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNB1P11230 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNB1P11230 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNB1P11230 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNB1P11230 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNB1P11230 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.5■□□□□ 0.39
CHRNB1P11230 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms