Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 PCDHA12-202ENST00000613593 2588 ntBASIC14.23□□□□□ -0.13
CGB3P0DN86 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.23□□□□□ -0.13
CGB3P0DN86 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.23□□□□□ -0.13
CGB3P0DN86 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.23□□□□□ -0.13
CGB3P0DN86 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.23□□□□□ -0.13
CGB3P0DN86 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 AC106820.2-201ENST00000563775 3264 ntBASIC14.23□□□□□ -0.13
CGB3P0DN86 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CGB3P0DN86 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
CGB3P0DN86 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.22□□□□□ -0.13
CGB3P0DN86 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CGB3P0DN86 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CGB3P0DN86 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CGB3P0DN86 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.22□□□□□ -0.13
CGB3P0DN86 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.22□□□□□ -0.13
CGB3P0DN86 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.22□□□□□ -0.13
CGB3P0DN86 AC091304.2-201ENST00000564639 760 ntBASIC14.22□□□□□ -0.13
CGB3P0DN86 NKAPP1-205ENST00000585790 367 ntBASIC14.22□□□□□ -0.13
CGB3P0DN86 AL355877.3-201ENST00000622820 899 ntBASIC14.22□□□□□ -0.13
CGB3P0DN86 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.22□□□□□ -0.13
CGB3P0DN86 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CGB3P0DN86 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CGB3P0DN86 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.22□□□□□ -0.13
CGB3P0DN86 GPR89P-201ENST00000407924 1495 ntBASIC14.22□□□□□ -0.13
CGB3P0DN86 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CGB3P0DN86 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CGB3P0DN86 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.22□□□□□ -0.13
CGB3P0DN86 AC097637.2-201ENST00000624096 1997 ntBASIC14.22□□□□□ -0.13
CGB3P0DN86 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CGB3P0DN86 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.22□□□□□ -0.13
CGB3P0DN86 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.22□□□□□ -0.13
CGB3P0DN86 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CGB3P0DN86 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CGB3P0DN86 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CGB3P0DN86 FRMD8P1-201ENST00000440433 1524 ntBASIC14.21□□□□□ -0.13
CGB3P0DN86 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CGB3P0DN86 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CGB3P0DN86 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
CGB3P0DN86 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CGB3P0DN86 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CGB3P0DN86 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CGB3P0DN86 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CGB3P0DN86 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CGB3P0DN86 LINC00982-205ENST00000420957 435 ntBASIC14.21□□□□□ -0.13
CGB3P0DN86 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.21□□□□□ -0.13
CGB3P0DN86 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.21□□□□□ -0.13
CGB3P0DN86 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CGB3P0DN86 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.21□□□□□ -0.13
CGB3P0DN86 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CGB3P0DN86 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.21□□□□□ -0.13
CGB3P0DN86 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.21□□□□□ -0.13
CGB3P0DN86 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CGB3P0DN86 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CGB3P0DN86 REXO1L6P-202ENST00000619970 1078 ntBASIC14.21□□□□□ -0.13
CGB3P0DN86 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CGB3P0DN86 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CGB3P0DN86 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms