Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 AL353135.1-201ENST00000606729 504 ntBASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 AC055717.3-201ENST00000622967 595 ntBASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 AC079781.4-201ENST00000641908 219 ntBASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 AC097637.2-201ENST00000624096 1997 ntBASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40ALP0C0E4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 AP002414.1-201ENST00000391405 1147 ntBASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 AC023274.1-201ENST00000418278 595 ntBASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 MIR4751-201ENST00000578027 74 ntBASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 GGTLC5P-201ENST00000617623 998 ntBASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 AC002310.6-201ENST00000624451 1377 ntBASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40ALP0C0E4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40ALP0C0E4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms