Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.14■□□□□ 0.01
SFTPBP07988 AC004263.2-201ENST00000617183 678 ntBASIC15.14■□□□□ 0.01
SFTPBP07988 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
SFTPBP07988 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.14■□□□□ 0.01
SFTPBP07988 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.14■□□□□ 0.01
SFTPBP07988 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.14■□□□□ 0.01
SFTPBP07988 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.14■□□□□ 0.01
SFTPBP07988 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SFTPBP07988 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.14■□□□□ 0.01
SFTPBP07988 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SFTPBP07988 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.14■□□□□ 0.01
SFTPBP07988 HLA-J-201ENST00000462773 1622 ntBASIC15.14■□□□□ 0.01
SFTPBP07988 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
SFTPBP07988 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 CROCCP2-202ENST00000412962 2773 ntBASIC15.13■□□□□ 0.01
SFTPBP07988 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.13■□□□□ 0.01
SFTPBP07988 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SFTPBP07988 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
SFTPBP07988 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SFTPBP07988 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.13■□□□□ 0.01
SFTPBP07988 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SFTPBP07988 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.13■□□□□ 0.01
SFTPBP07988 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 KRT18P48-201ENST00000434763 852 ntBASIC15.13■□□□□ 0.01
SFTPBP07988 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.13■□□□□ 0.01
SFTPBP07988 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SFTPBP07988 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.13■□□□□ 0.01
SFTPBP07988 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SFTPBP07988 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SFTPBP07988 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SFTPBP07988 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.13■□□□□ 0.01
SFTPBP07988 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SFTPBP07988 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.13■□□□□ 0.01
SFTPBP07988 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.12■□□□□ 0.01
SFTPBP07988 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.12■□□□□ 0.01
SFTPBP07988 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SFTPBP07988 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.12■□□□□ 0.01
SFTPBP07988 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SFTPBP07988 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.12■□□□□ 0.01
SFTPBP07988 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
SFTPBP07988 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
SFTPBP07988 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.12■□□□□ 0.01
SFTPBP07988 AC069148.1-201ENST00000608741 768 ntBASIC15.12■□□□□ 0.01
SFTPBP07988 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.12■□□□□ 0.01
SFTPBP07988 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SFTPBP07988 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.12■□□□□ 0.01
SFTPBP07988 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SFTPBP07988 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.12■□□□□ 0.01
SFTPBP07988 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SFTPBP07988 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SFTPBP07988 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SFTPBP07988 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SFTPBP07988 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms