Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 IGHV3-52-201ENST00000519770 353 ntBASIC17.82■□□□□ 0.44
MT-CO1P00395 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.82■□□□□ 0.44
MT-CO1P00395 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.82■□□□□ 0.44
MT-CO1P00395 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.82■□□□□ 0.44
MT-CO1P00395 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.82■□□□□ 0.44
MT-CO1P00395 MIR7706-201ENST00000613747 67 ntBASIC17.82■□□□□ 0.44
MT-CO1P00395 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.82■□□□□ 0.44
MT-CO1P00395 AL022326.1-202ENST00000641533 845 ntBASIC17.82■□□□□ 0.44
MT-CO1P00395 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-CO1P00395 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-CO1P00395 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
MT-CO1P00395 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-CO1P00395 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.82■□□□□ 0.44
MT-CO1P00395 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-CO1P00395 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
MT-CO1P00395 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.82■□□□□ 0.44
MT-CO1P00395 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-CO1P00395 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.82■□□□□ 0.44
MT-CO1P00395 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-CO1P00395 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MT-CO1P00395 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-CO1P00395 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-CO1P00395 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MT-CO1P00395 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-CO1P00395 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 KLF4P1-201ENST00000412782 1185 ntBASIC17.81■□□□□ 0.44
MT-CO1P00395 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.81■□□□□ 0.44
MT-CO1P00395 PRYP5-201ENST00000451909 266 ntBASIC17.81■□□□□ 0.44
MT-CO1P00395 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.81■□□□□ 0.44
MT-CO1P00395 AC012640.2-201ENST00000561606 901 ntBASIC17.81■□□□□ 0.44
MT-CO1P00395 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-CO1P00395 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-CO1P00395 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
MT-CO1P00395 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.81■□□□□ 0.44
MT-CO1P00395 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
MT-CO1P00395 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-CO1P00395 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.81■□□□□ 0.44
MT-CO1P00395 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MT-CO1P00395 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-CO1P00395 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MT-CO1P00395 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.81■□□□□ 0.44
MT-CO1P00395 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-CO1P00395 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-CO1P00395 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.8■□□□□ 0.44
MT-CO1P00395 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-CO1P00395 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MT-CO1P00395 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-CO1P00395 AC243591.1-201ENST00000452967 1364 ntBASIC17.8■□□□□ 0.44
MT-CO1P00395 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-CO1P00395 LINC00304-203ENST00000565008 1864 ntBASIC17.8■□□□□ 0.44
MT-CO1P00395 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-CO1P00395 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-CO1P00395 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-CO1P00395 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.8■□□□□ 0.44
MT-CO1P00395 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.8■□□□□ 0.44
MT-CO1P00395 OR7E14P-202ENST00000530490 1290 ntBASIC17.8■□□□□ 0.44
MT-CO1P00395 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-CO1P00395 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.8■□□□□ 0.44
MT-CO1P00395 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
MT-CO1P00395 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.8■□□□□ 0.44
MT-CO1P00395 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-CO1P00395 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-CO1P00395 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-CO1P00395 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MT-CO1P00395 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-CO1P00395 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-CO1P00395 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-CO1P00395 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
MT-CO1P00395 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MT-CO1P00395 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-CO1P00395 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-CO1P00395 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MT-CO1P00395 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-CO1P00395 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.79■□□□□ 0.44
MT-CO1P00395 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MT-CO1P00395 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.79■□□□□ 0.44
MT-CO1P00395 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-CO1P00395 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MT-CO1P00395 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-CO1P00395 AC003669.1-201ENST00000334569 611 ntBASIC17.79■□□□□ 0.44
MT-CO1P00395 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.79■□□□□ 0.44
MT-CO1P00395 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MT-CO1P00395 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
MT-CO1P00395 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.79■□□□□ 0.44
MT-CO1P00395 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.79■□□□□ 0.44
MT-CO1P00395 STK19B-204ENST00000512515 211 ntBASIC17.79■□□□□ 0.44
MT-CO1P00395 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.79■□□□□ 0.44
MT-CO1P00395 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms