Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TOP3BO95985 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TOP3BO95985 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.81■□□□□ 0.44
TOP3BO95985 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.81■□□□□ 0.44
TOP3BO95985 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TOP3BO95985 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
TOP3BO95985 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.81■□□□□ 0.44
TOP3BO95985 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.81■□□□□ 0.44
TOP3BO95985 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.81■□□□□ 0.44
TOP3BO95985 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.81■□□□□ 0.44
TOP3BO95985 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TOP3BO95985 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 AC124067.4-201ENST00000519691 2379 ntBASIC17.81■□□□□ 0.44
TOP3BO95985 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TOP3BO95985 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.81■□□□□ 0.44
TOP3BO95985 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP3BO95985 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.81■□□□□ 0.44
TOP3BO95985 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.81■□□□□ 0.44
TOP3BO95985 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.8■□□□□ 0.44
TOP3BO95985 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.8■□□□□ 0.44
TOP3BO95985 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TOP3BO95985 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.8■□□□□ 0.44
TOP3BO95985 AC009949.1-201ENST00000623048 1830 ntBASIC17.8■□□□□ 0.44
TOP3BO95985 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.8■□□□□ 0.44
TOP3BO95985 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TOP3BO95985 AC132008.2-207ENST00000454517 770 ntBASIC17.8■□□□□ 0.44
TOP3BO95985 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.8■□□□□ 0.44
TOP3BO95985 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.8■□□□□ 0.44
TOP3BO95985 BNIP3P18-201ENST00000593976 575 ntBASIC17.8■□□□□ 0.44
TOP3BO95985 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.8■□□□□ 0.44
TOP3BO95985 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.8■□□□□ 0.44
TOP3BO95985 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.8■□□□□ 0.44
TOP3BO95985 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.8■□□□□ 0.44
TOP3BO95985 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.8■□□□□ 0.44
TOP3BO95985 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.8■□□□□ 0.44
TOP3BO95985 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOP3BO95985 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.8■□□□□ 0.44
TOP3BO95985 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TOP3BO95985 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.79■□□□□ 0.44
TOP3BO95985 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.79■□□□□ 0.44
TOP3BO95985 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TOP3BO95985 REXO1L11P-201ENST00000620964 1927 ntBASIC17.79■□□□□ 0.44
TOP3BO95985 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.79■□□□□ 0.44
TOP3BO95985 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 IGHGP-201ENST00000390555 1178 ntBASIC17.79■□□□□ 0.44
TOP3BO95985 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.79■□□□□ 0.44
TOP3BO95985 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.79■□□□□ 0.44
TOP3BO95985 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.79■□□□□ 0.44
TOP3BO95985 VENTXP7-201ENST00000475503 772 ntBASIC17.79■□□□□ 0.44
TOP3BO95985 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.79■□□□□ 0.44
TOP3BO95985 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.79■□□□□ 0.44
TOP3BO95985 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.79■□□□□ 0.44
TOP3BO95985 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TOP3BO95985 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.79■□□□□ 0.44
TOP3BO95985 AC027601.4-201ENST00000611259 610 ntBASIC17.79■□□□□ 0.44
TOP3BO95985 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TOP3BO95985 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TOP3BO95985 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP3BO95985 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP3BO95985 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP3BO95985 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.78■□□□□ 0.44
TOP3BO95985 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms