Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE6O95741 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.06■□□□□ 0.32
CPNE6O95741 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.06■□□□□ 0.32
CPNE6O95741 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.06■□□□□ 0.32
CPNE6O95741 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE6O95741 Z83851.2-201ENST00000609564 659 ntBASIC17.06■□□□□ 0.32
CPNE6O95741 AC027601.4-201ENST00000611259 610 ntBASIC17.06■□□□□ 0.32
CPNE6O95741 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.06■□□□□ 0.32
CPNE6O95741 AD001527.2-201ENST00000622994 785 ntBASIC17.06■□□□□ 0.32
CPNE6O95741 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.06■□□□□ 0.32
CPNE6O95741 PP12613-201ENST00000424958 2230 ntBASIC17.06■□□□□ 0.32
CPNE6O95741 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.06■□□□□ 0.32
CPNE6O95741 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CPNE6O95741 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.06■□□□□ 0.32
CPNE6O95741 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE6O95741 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE6O95741 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE6O95741 AC022211.2-201ENST00000585075 2527 ntBASIC17.06■□□□□ 0.32
CPNE6O95741 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE6O95741 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE6O95741 BCL2-203ENST00000589955 5011 ntBASIC17.06■□□□□ 0.32
CPNE6O95741 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.06■□□□□ 0.32
CPNE6O95741 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CPNE6O95741 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CPNE6O95741 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE6O95741 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CPNE6O95741 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CPNE6O95741 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE6O95741 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE6O95741 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.05■□□□□ 0.32
CPNE6O95741 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE6O95741 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE6O95741 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE6O95741 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE6O95741 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.05■□□□□ 0.32
CPNE6O95741 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.05■□□□□ 0.32
CPNE6O95741 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.05■□□□□ 0.32
CPNE6O95741 AL591424.1-201ENST00000442569 1213 ntBASIC17.05■□□□□ 0.32
CPNE6O95741 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.05■□□□□ 0.32
CPNE6O95741 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.05■□□□□ 0.32
CPNE6O95741 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.05■□□□□ 0.32
CPNE6O95741 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE6O95741 AC073592.4-201ENST00000623827 446 ntBASIC17.05■□□□□ 0.32
CPNE6O95741 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.05■□□□□ 0.32
CPNE6O95741 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE6O95741 AL118508.1-201ENST00000613502 2345 ntBASIC17.05■□□□□ 0.32
CPNE6O95741 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE6O95741 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE6O95741 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.05■□□□□ 0.32
CPNE6O95741 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE6O95741 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE6O95741 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.05■□□□□ 0.32
CPNE6O95741 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE6O95741 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CPNE6O95741 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE6O95741 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE6O95741 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CPNE6O95741 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CPNE6O95741 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CPNE6O95741 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CPNE6O95741 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE6O95741 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 COX5BP2-201ENST00000392354 334 ntBASIC17.04■□□□□ 0.32
CPNE6O95741 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 BX842568.4-201ENST00000421222 227 ntBASIC17.04■□□□□ 0.32
CPNE6O95741 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE6O95741 BX005266.1-201ENST00000473402 457 ntBASIC17.04■□□□□ 0.32
CPNE6O95741 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 RNA5SP415-201ENST00000517246 115 ntBASIC17.04■□□□□ 0.32
CPNE6O95741 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CPNE6O95741 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CPNE6O95741 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE6O95741 FAM197Y3-203ENST00000618346 717 ntBASIC17.04■□□□□ 0.32
CPNE6O95741 AC011676.5-201ENST00000624864 2660 ntBASIC17.04■□□□□ 0.32
CPNE6O95741 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CPNE6O95741 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CPNE6O95741 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE6O95741 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE6O95741 SIGLEC16-201ENST00000599858 1437 ntBASIC17.04■□□□□ 0.32
CPNE6O95741 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE6O95741 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE6O95741 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms