Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.42■□□□□ 0.06
ALX3O95076 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.42■□□□□ 0.06
ALX3O95076 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
ALX3O95076 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ALX3O95076 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ALX3O95076 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ALX3O95076 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.42■□□□□ 0.06
ALX3O95076 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.42■□□□□ 0.06
ALX3O95076 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ALX3O95076 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.42■□□□□ 0.06
ALX3O95076 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ALX3O95076 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ALX3O95076 HLA-J-201ENST00000462773 1622 ntBASIC15.42■□□□□ 0.06
ALX3O95076 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ALX3O95076 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.42■□□□□ 0.06
ALX3O95076 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ALX3O95076 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ALX3O95076 AC100803.2-201ENST00000562459 1963 ntBASIC15.42■□□□□ 0.06
ALX3O95076 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ALX3O95076 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ALX3O95076 LINC00304-203ENST00000565008 1864 ntBASIC15.42■□□□□ 0.06
ALX3O95076 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.41■□□□□ 0.06
ALX3O95076 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.41■□□□□ 0.06
ALX3O95076 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.41■□□□□ 0.06
ALX3O95076 KRT18P65-201ENST00000439811 1286 ntBASIC15.41■□□□□ 0.06
ALX3O95076 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.41■□□□□ 0.06
ALX3O95076 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.41■□□□□ 0.06
ALX3O95076 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.41■□□□□ 0.06
ALX3O95076 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.41■□□□□ 0.06
ALX3O95076 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.41■□□□□ 0.06
ALX3O95076 RN7SL850P-201ENST00000579959 291 ntBASIC15.41■□□□□ 0.06
ALX3O95076 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.41■□□□□ 0.06
ALX3O95076 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.41■□□□□ 0.06
ALX3O95076 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.41■□□□□ 0.06
ALX3O95076 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ALX3O95076 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ALX3O95076 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ALX3O95076 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALX3O95076 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ALX3O95076 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ALX3O95076 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 TPM4P1-201ENST00000436100 807 ntBASIC15.4■□□□□ 0.06
ALX3O95076 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.4■□□□□ 0.06
ALX3O95076 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.4■□□□□ 0.06
ALX3O95076 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.4■□□□□ 0.06
ALX3O95076 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.4■□□□□ 0.06
ALX3O95076 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ALX3O95076 AC097493.4-201ENST00000641197 219 ntBASIC15.4■□□□□ 0.06
ALX3O95076 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
ALX3O95076 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.4■□□□□ 0.06
ALX3O95076 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
ALX3O95076 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
ALX3O95076 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ALX3O95076 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.4■□□□□ 0.06
ALX3O95076 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ALX3O95076 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ALX3O95076 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ALX3O95076 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.39■□□□□ 0.05
ALX3O95076 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.39■□□□□ 0.05
ALX3O95076 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ALX3O95076 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ALX3O95076 AL603756.1-201ENST00000606511 2163 ntBASIC15.39■□□□□ 0.05
ALX3O95076 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms