Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLPXO76031 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLPXO76031 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.82■□□□□ 0.12
CLPXO76031 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLPXO76031 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLPXO76031 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.82■□□□□ 0.12
CLPXO76031 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLPXO76031 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLPXO76031 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLPXO76031 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLPXO76031 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLPXO76031 AC126177.1-201ENST00000547829 2218 ntBASIC15.82■□□□□ 0.12
CLPXO76031 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.82■□□□□ 0.12
CLPXO76031 AC144831.1-201ENST00000573312 2656 ntBASIC15.81■□□□□ 0.12
CLPXO76031 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLPXO76031 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.81■□□□□ 0.12
CLPXO76031 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CLPXO76031 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CLPXO76031 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLPXO76031 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.81■□□□□ 0.12
CLPXO76031 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.81■□□□□ 0.12
CLPXO76031 SDHAP2-201ENST00000455183 2001 ntBASIC15.81■□□□□ 0.12
CLPXO76031 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLPXO76031 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.81■□□□□ 0.12
CLPXO76031 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.81■□□□□ 0.12
CLPXO76031 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.81■□□□□ 0.12
CLPXO76031 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 AC016396.2-201ENST00000562575 1417 ntBASIC15.81■□□□□ 0.12
CLPXO76031 AC026271.3-201ENST00000571884 352 ntBASIC15.81■□□□□ 0.12
CLPXO76031 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.81■□□□□ 0.12
CLPXO76031 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.81■□□□□ 0.12
CLPXO76031 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.81■□□□□ 0.12
CLPXO76031 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CLPXO76031 AC133561.5-201ENST00000635547 218 ntBASIC15.81■□□□□ 0.12
CLPXO76031 AC097493.4-201ENST00000641197 219 ntBASIC15.81■□□□□ 0.12
CLPXO76031 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPXO76031 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLPXO76031 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CLPXO76031 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLPXO76031 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.81■□□□□ 0.12
CLPXO76031 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.8■□□□□ 0.12
CLPXO76031 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPXO76031 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLPXO76031 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPXO76031 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.8■□□□□ 0.12
CLPXO76031 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLPXO76031 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLPXO76031 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPXO76031 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.8■□□□□ 0.12
CLPXO76031 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.8■□□□□ 0.12
CLPXO76031 KRT18P21-201ENST00000515767 1272 ntBASIC15.8■□□□□ 0.12
CLPXO76031 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.8■□□□□ 0.12
CLPXO76031 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLPXO76031 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.8■□□□□ 0.12
CLPXO76031 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.8■□□□□ 0.12
CLPXO76031 CR392000.1-201ENST00000624770 1228 ntBASIC15.8■□□□□ 0.12
CLPXO76031 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLPXO76031 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLPXO76031 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.8■□□□□ 0.12
CLPXO76031 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLPXO76031 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPXO76031 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
CLPXO76031 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPXO76031 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms