Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDH7O60245 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDH7O60245 NKILA-202ENST00000614771 2598 ntBASIC16.6■□□□□ 0.25
PCDH7O60245 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 AC011676.5-201ENST00000624864 2660 ntBASIC16.6■□□□□ 0.25
PCDH7O60245 NSUN5P1-202ENST00000421140 1535 ntBASIC16.6■□□□□ 0.25
PCDH7O60245 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 NSUN5P2-203ENST00000457352 1529 ntBASIC16.6■□□□□ 0.25
PCDH7O60245 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDH7O60245 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDH7O60245 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PCDH7O60245 SLC25A1P3-201ENST00000395415 828 ntBASIC16.59■□□□□ 0.25
PCDH7O60245 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDH7O60245 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDH7O60245 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDH7O60245 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDH7O60245 KRT18P35-201ENST00000510488 1269 ntBASIC16.59■□□□□ 0.25
PCDH7O60245 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDH7O60245 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDH7O60245 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDH7O60245 AC069148.1-201ENST00000608741 768 ntBASIC16.59■□□□□ 0.25
PCDH7O60245 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDH7O60245 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDH7O60245 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH7O60245 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDH7O60245 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDH7O60245 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDH7O60245 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PCDH7O60245 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDH7O60245 AC060834.1-201ENST00000443027 2032 ntBASIC16.58■□□□□ 0.25
PCDH7O60245 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDH7O60245 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.25
PCDH7O60245 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PCDH7O60245 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDH7O60245 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PCDH7O60245 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDH7O60245 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
PCDH7O60245 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH7O60245 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDH7O60245 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.58■□□□□ 0.24
PCDH7O60245 STK19B-204ENST00000512515 211 ntBASIC16.58■□□□□ 0.24
PCDH7O60245 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH7O60245 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH7O60245 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDH7O60245 AC074051.2-201ENST00000565115 352 ntBASIC16.58■□□□□ 0.24
PCDH7O60245 BNIP3P18-201ENST00000593976 575 ntBASIC16.58■□□□□ 0.24
PCDH7O60245 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDH7O60245 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH7O60245 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH7O60245 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PCDH7O60245 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH7O60245 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH7O60245 LINC02012-201ENST00000608206 1725 ntBASIC16.58■□□□□ 0.24
PCDH7O60245 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH7O60245 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH7O60245 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH7O60245 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH7O60245 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH7O60245 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH7O60245 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH7O60245 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH7O60245 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDH7O60245 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH7O60245 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
PCDH7O60245 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDH7O60245 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCDH7O60245 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
PCDH7O60245 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PCDH7O60245 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH7O60245 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms